Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Chd6A3KFM7 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Chd6A3KFM7 Gm25947-201ENSMUST00000180343 110 ntBASIC9.21□□□□□ -0.93
Chd6A3KFM7 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Chd6A3KFM7 Mir7051-201ENSMUST00000184167 73 ntBASIC9.21□□□□□ -0.93
Chd6A3KFM7 Gm29266-201ENSMUST00000190392 600 ntTSL 3 BASIC9.21□□□□□ -0.93
Chd6A3KFM7 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Chd6A3KFM7 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Chd6A3KFM7 Gm8174-201ENSMUST00000064353 1001 ntBASIC9.21□□□□□ -0.93
Chd6A3KFM7 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Chd6A3KFM7 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Chd6A3KFM7 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Chd6A3KFM7 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC9.21□□□□□ -0.93
Chd6A3KFM7 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Chd6A3KFM7 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Chd6A3KFM7 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Chd6A3KFM7 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Chd6A3KFM7 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Chd6A3KFM7 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC9.21□□□□□ -0.93
Chd6A3KFM7 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Chd6A3KFM7 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC9.21□□□□□ -0.94
Chd6A3KFM7 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Chd6A3KFM7 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Chd6A3KFM7 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC9.21□□□□□ -0.94
Chd6A3KFM7 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Chd6A3KFM7 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Chd6A3KFM7 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC9.21□□□□□ -0.94
Chd6A3KFM7 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Chd6A3KFM7 Gm16439-201ENSMUST00000100687 564 ntBASIC9.21□□□□□ -0.94
Chd6A3KFM7 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC9.21□□□□□ -0.94
Chd6A3KFM7 Gm5510-201ENSMUST00000117826 486 ntBASIC9.21□□□□□ -0.94
Chd6A3KFM7 Gm23563-201ENSMUST00000174900 251 ntBASIC9.21□□□□□ -0.94
Chd6A3KFM7 Mir7115-201ENSMUST00000184275 64 ntBASIC9.21□□□□□ -0.94
Chd6A3KFM7 Gm28065-201ENSMUST00000185290 833 ntTSL 3 BASIC9.21□□□□□ -0.94
Chd6A3KFM7 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC9.21□□□□□ -0.94
Chd6A3KFM7 Gstp3-202ENSMUST00000189808 708 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Chd6A3KFM7 CR974487.1-201ENSMUST00000220984 413 ntBASIC9.21□□□□□ -0.94
Chd6A3KFM7 Ermard-209ENSMUST00000226561 1019 ntBASIC9.21□□□□□ -0.94
Chd6A3KFM7 AC174647.1-201ENSMUST00000227419 1271 ntBASIC9.21□□□□□ -0.94
Chd6A3KFM7 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Chd6A3KFM7 Olfr1425-201ENSMUST00000087828 939 ntBASIC9.21□□□□□ -0.94
Chd6A3KFM7 Olfr1424-201ENSMUST00000087830 942 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Chd6A3KFM7 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Chd6A3KFM7 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Chd6A3KFM7 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Chd6A3KFM7 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Chd6A3KFM7 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Chd6A3KFM7 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Chd6A3KFM7 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Chd6A3KFM7 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Chd6A3KFM7 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Chd6A3KFM7 Ssr1-203ENSMUST00000225246 1825 ntBASIC9.21□□□□□ -0.94
Chd6A3KFM7 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Scgb1b7-201ENSMUST00000108097 419 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Gm12047-201ENSMUST00000117561 944 ntBASIC9.2□□□□□ -0.94
Chd6A3KFM7 Gm3355-201ENSMUST00000160079 487 ntBASIC9.2□□□□□ -0.94
Chd6A3KFM7 Gm4753-201ENSMUST00000188327 1255 ntBASIC9.2□□□□□ -0.94
Chd6A3KFM7 Nuf2-203ENSMUST00000192248 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Chd6A3KFM7 4933436E23Rik-201ENSMUST00000192824 1111 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Gm35501-201ENSMUST00000213492 783 ntTSL 2 BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Gm25580-201ENSMUST00000083409 327 ntBASIC9.2□□□□□ -0.94
Chd6A3KFM7 Gm20554-201ENSMUST00000177421 2352 ntBASIC9.2□□□□□ -0.94
Chd6A3KFM7 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Kcnk16-202ENSMUST00000225596 2127 ntBASIC9.2□□□□□ -0.94
Chd6A3KFM7 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Chd6A3KFM7 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Gm5638-201ENSMUST00000118618 1258 ntBASIC9.2□□□□□ -0.94
Chd6A3KFM7 Gm3828-201ENSMUST00000121817 257 ntBASIC9.2□□□□□ -0.94
Chd6A3KFM7 Zfp961-204ENSMUST00000136516 601 ntTSL 2 BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Gm28499-201ENSMUST00000191576 666 ntTSL 2 BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Gm37678-201ENSMUST00000192908 1146 ntBASIC9.2□□□□□ -0.94
Chd6A3KFM7 Gm40153-201ENSMUST00000197904 637 ntTSL 3 BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Gm30301-201ENSMUST00000199474 652 ntTSL 5 BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Olfr371-202ENSMUST00000218663 1162 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Chd6A3KFM7 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Apex1-201ENSMUST00000049411 1239 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Gm5424-201ENSMUST00000053865 1240 ntBASIC9.2□□□□□ -0.94
Chd6A3KFM7 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Chd6A3KFM7 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms