Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 Gm12947-201ENSMUST00000116114 420 ntBASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 Gm15746-201ENSMUST00000120684 1027 ntBASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 Ighv1-70-201ENSMUST00000196509 351 ntBASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 Nsmce2-203ENSMUST00000227173 1122 ntBASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 Gm8420-201ENSMUST00000097103 598 ntBASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col16a1Q8BLX7 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Col16a1Q8BLX7 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col16a1Q8BLX7 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col16a1Q8BLX7 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col16a1Q8BLX7 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col16a1Q8BLX7 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col16a1Q8BLX7 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col16a1Q8BLX7 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col16a1Q8BLX7 Gm15815-201ENSMUST00000120569 255 ntBASIC14.78□□□□□ -0.04
Col16a1Q8BLX7 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC14.78□□□□□ -0.04
Col16a1Q8BLX7 Gm25288-201ENSMUST00000122800 265 ntBASIC14.78□□□□□ -0.04
Col16a1Q8BLX7 Gm5808-201ENSMUST00000178090 357 ntBASIC14.78□□□□□ -0.04
Col16a1Q8BLX7 Gm27316-201ENSMUST00000184884 277 ntBASIC14.78□□□□□ -0.04
Col16a1Q8BLX7 Gm18555-201ENSMUST00000197935 584 ntBASIC14.78□□□□□ -0.04
Col16a1Q8BLX7 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC14.78□□□□□ -0.04
Col16a1Q8BLX7 Gm44640-201ENSMUST00000206894 247 ntBASIC14.78□□□□□ -0.04
Col16a1Q8BLX7 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC14.78□□□□□ -0.04
Col16a1Q8BLX7 CT030195.2-201ENSMUST00000226074 1286 ntBASIC14.78□□□□□ -0.04
Col16a1Q8BLX7 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col16a1Q8BLX7 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col16a1Q8BLX7 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col16a1Q8BLX7 AC109214.1-201ENSMUST00000219520 1372 ntBASIC14.78□□□□□ -0.04
Col16a1Q8BLX7 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col16a1Q8BLX7 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col16a1Q8BLX7 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col16a1Q8BLX7 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col16a1Q8BLX7 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col16a1Q8BLX7 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Col16a1Q8BLX7 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col16a1Q8BLX7 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC14.78□□□□□ -0.04
Col16a1Q8BLX7 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col16a1Q8BLX7 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col16a1Q8BLX7 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC14.78□□□□□ -0.04
Col16a1Q8BLX7 CT010480.4-201ENSMUST00000224654 2283 ntBASIC14.78□□□□□ -0.04
Col16a1Q8BLX7 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col16a1Q8BLX7 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col16a1Q8BLX7 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col16a1Q8BLX7 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC14.77□□□□□ -0.04
Col16a1Q8BLX7 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col16a1Q8BLX7 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col16a1Q8BLX7 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col16a1Q8BLX7 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC14.77□□□□□ -0.04
Col16a1Q8BLX7 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC14.77□□□□□ -0.04
Col16a1Q8BLX7 Gm14006-201ENSMUST00000122132 981 ntBASIC14.77□□□□□ -0.04
Col16a1Q8BLX7 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC14.77□□□□□ -0.04
Col16a1Q8BLX7 Gm26174-201ENSMUST00000158415 219 ntBASIC14.77□□□□□ -0.04
Col16a1Q8BLX7 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC14.77□□□□□ -0.04
Col16a1Q8BLX7 Gm5254-201ENSMUST00000188353 977 ntBASIC14.77□□□□□ -0.04
Col16a1Q8BLX7 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Col16a1Q8BLX7 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC14.77□□□□□ -0.04
Col16a1Q8BLX7 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col16a1Q8BLX7 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Col16a1Q8BLX7 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC14.77□□□□□ -0.04
Col16a1Q8BLX7 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col16a1Q8BLX7 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Col16a1Q8BLX7 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col16a1Q8BLX7 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Col16a1Q8BLX7 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Col16a1Q8BLX7 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col16a1Q8BLX7 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col16a1Q8BLX7 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Col16a1Q8BLX7 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Col16a1Q8BLX7 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col16a1Q8BLX7 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Col16a1Q8BLX7 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC14.77□□□□□ -0.05
Col16a1Q8BLX7 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Col16a1Q8BLX7 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Col16a1Q8BLX7 Gm40414-201ENSMUST00000197608 481 ntBASIC14.77□□□□□ -0.05
Col16a1Q8BLX7 Gm30055-201ENSMUST00000203175 803 ntBASIC14.77□□□□□ -0.05
Col16a1Q8BLX7 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col16a1Q8BLX7 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col16a1Q8BLX7 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col16a1Q8BLX7 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col16a1Q8BLX7 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Col16a1Q8BLX7 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms