Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Ttc28Q80XJ3 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ttc28Q80XJ3 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ttc28Q80XJ3 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ttc28Q80XJ3 Gm15626-201ENSMUST00000117478 868 ntBASIC9.62□□□□□ -0.87
Ttc28Q80XJ3 Gm14740-201ENSMUST00000118538 1150 ntBASIC9.62□□□□□ -0.87
Ttc28Q80XJ3 Gm8019-201ENSMUST00000119317 587 ntBASIC9.62□□□□□ -0.87
Ttc28Q80XJ3 Gm15136-201ENSMUST00000120552 533 ntBASIC9.62□□□□□ -0.87
Ttc28Q80XJ3 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ttc28Q80XJ3 Gm19246-201ENSMUST00000173599 255 ntBASIC9.62□□□□□ -0.87
Ttc28Q80XJ3 Gm5210-201ENSMUST00000182150 1010 ntBASIC9.62□□□□□ -0.87
Ttc28Q80XJ3 Gm18014-201ENSMUST00000183369 817 ntBASIC9.62□□□□□ -0.87
Ttc28Q80XJ3 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ttc28Q80XJ3 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC9.62□□□□□ -0.87
Ttc28Q80XJ3 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ttc28Q80XJ3 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC9.62□□□□□ -0.87
Ttc28Q80XJ3 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ttc28Q80XJ3 CT025603.1-201ENSMUST00000224040 448 ntBASIC9.62□□□□□ -0.87
Ttc28Q80XJ3 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC9.62□□□□□ -0.87
Ttc28Q80XJ3 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Ttc28Q80XJ3 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ttc28Q80XJ3 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ttc28Q80XJ3 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ttc28Q80XJ3 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Ttc28Q80XJ3 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ttc28Q80XJ3 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Ttc28Q80XJ3 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ttc28Q80XJ3 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ttc28Q80XJ3 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ttc28Q80XJ3 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ttc28Q80XJ3 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Ttc28Q80XJ3 Gm42970-201ENSMUST00000196407 1352 ntBASIC9.62□□□□□ -0.87
Ttc28Q80XJ3 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ttc28Q80XJ3 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ttc28Q80XJ3 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Gm13284-201ENSMUST00000121020 547 ntBASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Gm14113-201ENSMUST00000121399 976 ntBASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Gm43547-201ENSMUST00000197729 328 ntBASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 AC122891.1-201ENSMUST00000218671 268 ntBASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 AC164099.1-201ENSMUST00000227780 333 ntBASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Gm22937-201ENSMUST00000103954 131 ntBASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Mir1249-201ENSMUST00000116791 98 ntBASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Snord23-201ENSMUST00000116828 109 ntBASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Gm25394-201ENSMUST00000157338 133 ntBASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Gm43242-201ENSMUST00000199507 1776 ntBASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Ttc28Q80XJ3 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms