Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.34□□□□□ -0.43
Foxd4Q60688 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Foxd4Q60688 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Foxd4Q60688 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Foxd4Q60688 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Foxd4Q60688 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Foxd4Q60688 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Foxd4Q60688 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
Foxd4Q60688 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Foxd4Q60688 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Foxd4Q60688 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Foxd4Q60688 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.34□□□□□ -0.43
Foxd4Q60688 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Foxd4Q60688 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.34□□□□□ -0.43
Foxd4Q60688 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Foxd4Q60688 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Foxd4Q60688 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Foxd4Q60688 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Foxd4Q60688 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.34□□□□□ -0.43
Foxd4Q60688 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Foxd4Q60688 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Foxd4Q60688 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.34□□□□□ -0.43
Foxd4Q60688 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Foxd4Q60688 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Foxd4Q60688 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Foxd4Q60688 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Foxd4Q60688 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Foxd4Q60688 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Foxd4Q60688 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Foxd4Q60688 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Foxd4Q60688 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.43
Foxd4Q60688 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Foxd4Q60688 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Foxd4Q60688 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.33□□□□□ -0.44
Foxd4Q60688 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Foxd4Q60688 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Foxd4Q60688 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Foxd4Q60688 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Foxd4Q60688 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Foxd4Q60688 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Foxd4Q60688 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Foxd4Q60688 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Foxd4Q60688 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Foxd4Q60688 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Foxd4Q60688 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Foxd4Q60688 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Foxd4Q60688 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Foxd4Q60688 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Foxd4Q60688 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC12.33□□□□□ -0.44
Foxd4Q60688 Gm13875-201ENSMUST00000120162 282 ntBASIC12.33□□□□□ -0.44
Foxd4Q60688 Gm26083-201ENSMUST00000157904 193 ntBASIC12.33□□□□□ -0.44
Foxd4Q60688 Gm16571-201ENSMUST00000159112 291 ntBASIC12.33□□□□□ -0.44
Foxd4Q60688 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Foxd4Q60688 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.33□□□□□ -0.44
Foxd4Q60688 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Foxd4Q60688 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC12.33□□□□□ -0.44
Foxd4Q60688 Gm29396-201ENSMUST00000185659 716 ntBASIC12.33□□□□□ -0.44
Foxd4Q60688 Gm29199-201ENSMUST00000187766 775 ntBASIC12.33□□□□□ -0.44
Foxd4Q60688 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.33□□□□□ -0.44
Foxd4Q60688 Gm43489-201ENSMUST00000196810 993 ntBASIC12.33□□□□□ -0.44
Foxd4Q60688 Gm43815-201ENSMUST00000197676 990 ntBASIC12.33□□□□□ -0.44
Foxd4Q60688 Gm43946-201ENSMUST00000204058 886 ntBASIC12.33□□□□□ -0.44
Foxd4Q60688 Gm39404-201ENSMUST00000216350 313 ntBASIC12.33□□□□□ -0.44
Foxd4Q60688 CT025618.1-201ENSMUST00000227409 1279 ntBASIC12.33□□□□□ -0.44
Foxd4Q60688 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Foxd4Q60688 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Foxd4Q60688 Gm24919-201ENSMUST00000083020 106 ntBASIC12.33□□□□□ -0.44
Foxd4Q60688 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Foxd4Q60688 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Foxd4Q60688 Prpf18-204ENSMUST00000152362 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Foxd4Q60688 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Foxd4Q60688 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Foxd4Q60688 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Foxd4Q60688 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Foxd4Q60688 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Foxd4Q60688 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Foxd4Q60688 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Foxd4Q60688 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Foxd4Q60688 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Foxd4Q60688 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Foxd4Q60688 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Foxd4Q60688 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Foxd4Q60688 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Foxd4Q60688 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Foxd4Q60688 Cenpk-202ENSMUST00000070761 1306 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Foxd4Q60688 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Foxd4Q60688 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Foxd4Q60688 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Foxd4Q60688 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Foxd4Q60688 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Foxd4Q60688 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Foxd4Q60688 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Foxd4Q60688 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.32□□□□□ -0.44
Foxd4Q60688 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.32□□□□□ -0.44
Foxd4Q60688 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Foxd4Q60688 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Foxd4Q60688 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.32□□□□□ -0.44
Foxd4Q60688 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Foxd4Q60688 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.32□□□□□ -0.44
Foxd4Q60688 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms