Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC8.36□□□□□ -1.07
TcraP01849 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
TcraP01849 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC8.35□□□□□ -1.07
TcraP01849 Gm18782-201ENSMUST00000209023 1399 ntBASIC8.35□□□□□ -1.07
TcraP01849 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
TcraP01849 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TcraP01849 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TcraP01849 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
TcraP01849 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TcraP01849 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
TcraP01849 Sec22c-201ENSMUST00000078547 5713 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TcraP01849 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
TcraP01849 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TcraP01849 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC8.35□□□□□ -1.07
TcraP01849 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
TcraP01849 Gm15163-201ENSMUST00000120749 1302 ntBASIC8.35□□□□□ -1.07
TcraP01849 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TcraP01849 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TcraP01849 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
TcraP01849 Gm37806-201ENSMUST00000194524 6387 ntBASIC8.35□□□□□ -1.07
TcraP01849 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TcraP01849 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TcraP01849 Smarcc2-201ENSMUST00000026433 4533 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
TcraP01849 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TcraP01849 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
TcraP01849 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
TcraP01849 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
TcraP01849 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
TcraP01849 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TcraP01849 Gm12502-201ENSMUST00000120197 444 ntBASIC8.35□□□□□ -1.07
TcraP01849 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
TcraP01849 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC8.35□□□□□ -1.07
TcraP01849 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC8.35□□□□□ -1.07
TcraP01849 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC8.35□□□□□ -1.07
TcraP01849 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
TcraP01849 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
TcraP01849 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC8.35□□□□□ -1.07
TcraP01849 Gm29127-201ENSMUST00000188304 517 ntBASIC8.35□□□□□ -1.07
TcraP01849 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
TcraP01849 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC8.35□□□□□ -1.07
TcraP01849 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
TcraP01849 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TcraP01849 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC8.35□□□□□ -1.07
TcraP01849 AC022775.2-201ENSMUST00000227885 646 ntBASIC8.35□□□□□ -1.07
TcraP01849 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TcraP01849 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC8.35□□□□□ -1.07
TcraP01849 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
TcraP01849 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TcraP01849 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TcraP01849 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
TcraP01849 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC8.35□□□□□ -1.07
TcraP01849 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
TcraP01849 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TcraP01849 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TcraP01849 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
TcraP01849 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
TcraP01849 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
TcraP01849 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
TcraP01849 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TcraP01849 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC8.35□□□□□ -1.07
TcraP01849 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
TcraP01849 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC8.35□□□□□ -1.07
TcraP01849 Aff1-201ENSMUST00000031256 8312 ntAPPRIS P4 TSL 5 BASIC8.35□□□□□ -1.07
TcraP01849 Sema4g-203ENSMUST00000179305 4290 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TcraP01849 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC8.34□□□□□ -1.07
TcraP01849 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
TcraP01849 Tsc1-204ENSMUST00000113870 7595 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
TcraP01849 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
TcraP01849 Gm3287-205ENSMUST00000228893 1332 ntBASIC8.34□□□□□ -1.07
TcraP01849 Gm5620-201ENSMUST00000077991 1348 ntBASIC8.34□□□□□ -1.07
TcraP01849 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TcraP01849 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TcraP01849 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TcraP01849 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
TcraP01849 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TcraP01849 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TcraP01849 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TcraP01849 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC8.34□□□□□ -1.07
TcraP01849 AU022252-203ENSMUST00000141112 7151 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TcraP01849 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
TcraP01849 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TcraP01849 Tsc2-203ENSMUST00000226284 6266 ntAPPRIS ALT2 BASIC8.34□□□□□ -1.07
TcraP01849 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
TcraP01849 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
TcraP01849 Gm12390-201ENSMUST00000117897 397 ntBASIC8.34□□□□□ -1.07
TcraP01849 Gm12314-201ENSMUST00000118104 538 ntBASIC8.34□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms