Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC9.23□□□□□ -0.93
Chd6A3KFM7 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Chd6A3KFM7 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Chd6A3KFM7 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Chd6A3KFM7 Gm24992-201ENSMUST00000157412 130 ntBASIC9.23□□□□□ -0.93
Chd6A3KFM7 Ppp1r11-203ENSMUST00000174711 520 ntAPPRIS P1 TSL 3 BASIC9.23□□□□□ -0.93
Chd6A3KFM7 Gm19705-204ENSMUST00000181524 413 ntTSL 2 BASIC9.23□□□□□ -0.93
Chd6A3KFM7 Cd24a-202ENSMUST00000214476 743 ntAPPRIS ALT2 TSL 3 BASIC9.23□□□□□ -0.93
Chd6A3KFM7 CT009539.1-201ENSMUST00000226465 220 ntBASIC9.23□□□□□ -0.93
Chd6A3KFM7 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Chd6A3KFM7 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Chd6A3KFM7 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Chd6A3KFM7 Pnlip-201ENSMUST00000057270 1485 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Chd6A3KFM7 Gm15599-201ENSMUST00000122283 1345 ntBASIC9.23□□□□□ -0.93
Chd6A3KFM7 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
Chd6A3KFM7 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Gm8661-201ENSMUST00000118688 992 ntBASIC9.22□□□□□ -0.93
Chd6A3KFM7 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC9.22□□□□□ -0.93
Chd6A3KFM7 1700026D11Rik-205ENSMUST00000151417 789 ntTSL 3 BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Gm9409-201ENSMUST00000197017 316 ntBASIC9.22□□□□□ -0.93
Chd6A3KFM7 Gm44711-201ENSMUST00000205414 1264 ntBASIC9.22□□□□□ -0.93
Chd6A3KFM7 CT009713.2-201ENSMUST00000225532 1149 ntBASIC9.22□□□□□ -0.93
Chd6A3KFM7 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Olfr642-201ENSMUST00000052660 945 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Olfr978-201ENSMUST00000057161 936 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Olfr1512-201ENSMUST00000071221 942 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Gm5148-202ENSMUST00000099128 1098 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Ccl6-201ENSMUST00000019071 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Chd6A3KFM7 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Gm12247-201ENSMUST00000117585 670 ntBASIC9.22□□□□□ -0.93
Chd6A3KFM7 Gm14676-201ENSMUST00000117722 858 ntBASIC9.22□□□□□ -0.93
Chd6A3KFM7 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Gm5526-201ENSMUST00000153604 423 ntBASIC9.22□□□□□ -0.93
Chd6A3KFM7 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC9.22□□□□□ -0.93
Chd6A3KFM7 H2al1a-201ENSMUST00000188439 501 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Gm42441-201ENSMUST00000199778 748 ntBASIC9.22□□□□□ -0.93
Chd6A3KFM7 Gm43965-201ENSMUST00000203779 789 ntBASIC9.22□□□□□ -0.93
Chd6A3KFM7 Gm45258-201ENSMUST00000210042 853 ntBASIC9.22□□□□□ -0.93
Chd6A3KFM7 Pvrig-201ENSMUST00000211088 1080 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Chd6A3KFM7 AC122459.4-201ENSMUST00000228654 551 ntBASIC9.22□□□□□ -0.93
Chd6A3KFM7 Gm11437-201ENSMUST00000050771 1239 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Chd6A3KFM7 AC140209.1-203ENSMUST00000227412 1524 ntBASIC9.22□□□□□ -0.93
Chd6A3KFM7 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Gm4735-201ENSMUST00000138679 1302 ntBASIC9.22□□□□□ -0.93
Chd6A3KFM7 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Kcnk2-209ENSMUST00000194402 1373 ntTSL 5 BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Apool-201ENSMUST00000026599 1359 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Eif2b3-201ENSMUST00000070610 1369 ntTSL 5 BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Chd6A3KFM7 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC9.21□□□□□ -0.93
Chd6A3KFM7 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Chd6A3KFM7 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Chd6A3KFM7 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Chd6A3KFM7 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Chd6A3KFM7 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Chd6A3KFM7 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC9.21□□□□□ -0.93
Chd6A3KFM7 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Chd6A3KFM7 Gm13758-201ENSMUST00000118699 743 ntBASIC9.21□□□□□ -0.93
Chd6A3KFM7 Gm13217-201ENSMUST00000120466 953 ntBASIC9.21□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms