Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
U2af1Q9D883 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
U2af1Q9D883 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
U2af1Q9D883 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
U2af1Q9D883 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
U2af1Q9D883 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
U2af1Q9D883 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC15.08■□□□□ 0
U2af1Q9D883 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC15.08■□□□□ 0
U2af1Q9D883 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
U2af1Q9D883 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC15.08■□□□□ 0
U2af1Q9D883 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
U2af1Q9D883 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
U2af1Q9D883 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
U2af1Q9D883 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
U2af1Q9D883 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC15.08■□□□□ 0
U2af1Q9D883 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
U2af1Q9D883 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
U2af1Q9D883 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
U2af1Q9D883 Gm43984-201ENSMUST00000204572 2864 ntBASIC15.07■□□□□ 0
U2af1Q9D883 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC15.07■□□□□ 0
U2af1Q9D883 Nudt13-207ENSMUST00000224311 1574 ntBASIC15.07■□□□□ 0
U2af1Q9D883 Gm9279-201ENSMUST00000223175 1606 ntBASIC15.07■□□□□ 0
U2af1Q9D883 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
U2af1Q9D883 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
U2af1Q9D883 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC15.07■□□□□ 0
U2af1Q9D883 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC15.07■□□□□ 0
U2af1Q9D883 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
U2af1Q9D883 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
U2af1Q9D883 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC15.07■□□□□ 0
U2af1Q9D883 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
U2af1Q9D883 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
U2af1Q9D883 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
U2af1Q9D883 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
U2af1Q9D883 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC15.07■□□□□ 0
U2af1Q9D883 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC15.07■□□□□ 0
U2af1Q9D883 Gm11892-201ENSMUST00000117711 1202 ntBASIC15.07■□□□□ 0
U2af1Q9D883 Gm14395-201ENSMUST00000120494 563 ntBASIC15.07■□□□□ 0
U2af1Q9D883 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC15.07■□□□□ 0
U2af1Q9D883 Gm23694-201ENSMUST00000179335 110 ntBASIC15.07■□□□□ 0
U2af1Q9D883 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC15.07■□□□□ 0
U2af1Q9D883 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC15.07■□□□□ 0
U2af1Q9D883 Gm44545-201ENSMUST00000208262 746 ntBASIC15.07■□□□□ 0
U2af1Q9D883 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
U2af1Q9D883 Gm45856-201ENSMUST00000212752 416 ntBASIC15.07■□□□□ 0
U2af1Q9D883 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC15.07■□□□□ 0
U2af1Q9D883 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC15.07■□□□□ 0
U2af1Q9D883 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
U2af1Q9D883 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
U2af1Q9D883 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
U2af1Q9D883 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
U2af1Q9D883 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC15.07■□□□□ 0
U2af1Q9D883 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC15.07■□□□□ 0
U2af1Q9D883 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
U2af1Q9D883 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
U2af1Q9D883 Gm4900-201ENSMUST00000222046 1628 ntBASIC15.06■□□□□ 0
U2af1Q9D883 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC15.06■□□□□ 0
U2af1Q9D883 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
U2af1Q9D883 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC15.06■□□□□ 0
U2af1Q9D883 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
U2af1Q9D883 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
U2af1Q9D883 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
U2af1Q9D883 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC15.06■□□□□ 0
U2af1Q9D883 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
U2af1Q9D883 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
U2af1Q9D883 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
U2af1Q9D883 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
U2af1Q9D883 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
U2af1Q9D883 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
U2af1Q9D883 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC15.06■□□□□ 0
U2af1Q9D883 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
U2af1Q9D883 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
U2af1Q9D883 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
U2af1Q9D883 Gm11451-201ENSMUST00000118946 630 ntBASIC15.06■□□□□ 0
U2af1Q9D883 Gm12208-201ENSMUST00000122004 163 ntBASIC15.06■□□□□ 0
U2af1Q9D883 Gm14665-201ENSMUST00000122294 557 ntBASIC15.06■□□□□ 0
U2af1Q9D883 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC15.06■□□□□ 0
U2af1Q9D883 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC15.06■□□□□ 0
U2af1Q9D883 Gm22138-201ENSMUST00000158748 128 ntBASIC15.06■□□□□ 0
U2af1Q9D883 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC15.06■□□□□ 0
U2af1Q9D883 Gm28388-201ENSMUST00000186262 437 ntBASIC15.06■□□□□ 0
U2af1Q9D883 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC15.06■□□□□ 0
U2af1Q9D883 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC15.06■□□□□ 0
U2af1Q9D883 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC15.06■□□□□ 0
U2af1Q9D883 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC15.06■□□□□ 0
U2af1Q9D883 Gm9826-201ENSMUST00000029124 1299 ntBASIC15.06■□□□□ 0
U2af1Q9D883 Gm10254-201ENSMUST00000052888 867 ntBASIC15.06■□□□□ 0
U2af1Q9D883 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC15.06■□□□□ 0
U2af1Q9D883 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
U2af1Q9D883 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC15.06■□□□□ 0
U2af1Q9D883 Gm28424-201ENSMUST00000187393 1319 ntBASIC15.06■□□□□ 0
U2af1Q9D883 Gm6655-201ENSMUST00000201932 1309 ntBASIC15.06■□□□□ 0
U2af1Q9D883 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC15.06■□□□□ 0
U2af1Q9D883 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
U2af1Q9D883 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
U2af1Q9D883 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
U2af1Q9D883 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
U2af1Q9D883 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
U2af1Q9D883 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
U2af1Q9D883 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
U2af1Q9D883 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms