Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sf3a3Q9D554 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sf3a3Q9D554 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sf3a3Q9D554 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.54□□□□□ -0.56
Sf3a3Q9D554 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.54□□□□□ -0.56
Sf3a3Q9D554 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sf3a3Q9D554 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sf3a3Q9D554 CT025645.2-201ENSMUST00000223278 3827 ntBASIC11.54□□□□□ -0.56
Sf3a3Q9D554 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sf3a3Q9D554 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sf3a3Q9D554 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Sf3a3Q9D554 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sf3a3Q9D554 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sf3a3Q9D554 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Sf3a3Q9D554 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.54□□□□□ -0.56
Sf3a3Q9D554 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.54□□□□□ -0.56
Sf3a3Q9D554 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sf3a3Q9D554 Gm27682-201ENSMUST00000183930 110 ntBASIC11.54□□□□□ -0.56
Sf3a3Q9D554 Gm27839-201ENSMUST00000184242 106 ntBASIC11.54□□□□□ -0.56
Sf3a3Q9D554 Gm6439-201ENSMUST00000199849 862 ntBASIC11.54□□□□□ -0.56
Sf3a3Q9D554 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.54□□□□□ -0.56
Sf3a3Q9D554 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sf3a3Q9D554 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sf3a3Q9D554 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sf3a3Q9D554 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sf3a3Q9D554 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sf3a3Q9D554 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sf3a3Q9D554 Nudcd3-201ENSMUST00000066496 3927 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sf3a3Q9D554 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sf3a3Q9D554 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sf3a3Q9D554 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sf3a3Q9D554 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.54□□□□□ -0.56
Sf3a3Q9D554 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Sf3a3Q9D554 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sf3a3Q9D554 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sf3a3Q9D554 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sf3a3Q9D554 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sf3a3Q9D554 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Gm15920-201ENSMUST00000118998 402 ntBASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Gm12138-201ENSMUST00000122180 951 ntBASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Mir1894-201ENSMUST00000122802 81 ntBASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Gm3890-201ENSMUST00000182416 207 ntBASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Gm27847-201ENSMUST00000183711 107 ntBASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Gm27375-201ENSMUST00000183799 107 ntBASIC11.53□□□□□ -0.56
Sf3a3Q9D554 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Gm43517-201ENSMUST00000110746 3904 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Epn2-204ENSMUST00000108713 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC11.53□□□□□ -0.56
Sf3a3Q9D554 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms