Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn9aQ62205 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn9aQ62205 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Scn9aQ62205 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC13.31□□□□□ -0.28
Scn9aQ62205 Gm12009-201ENSMUST00000121361 1100 ntBASIC13.31□□□□□ -0.28
Scn9aQ62205 Gm22388-201ENSMUST00000158194 248 ntBASIC13.31□□□□□ -0.28
Scn9aQ62205 Gm6794-201ENSMUST00000203829 457 ntBASIC13.31□□□□□ -0.28
Scn9aQ62205 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC13.31□□□□□ -0.28
Scn9aQ62205 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn9aQ62205 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Scn9aQ62205 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn9aQ62205 Gm14005-209ENSMUST00000224993 1832 ntBASIC13.3□□□□□ -0.28
Scn9aQ62205 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn9aQ62205 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Scn9aQ62205 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn9aQ62205 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn9aQ62205 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Scn9aQ62205 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Scn9aQ62205 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn9aQ62205 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn9aQ62205 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scn9aQ62205 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn9aQ62205 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn9aQ62205 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn9aQ62205 Gm6755-201ENSMUST00000100598 864 ntBASIC13.3□□□□□ -0.28
Scn9aQ62205 Gm6740-201ENSMUST00000100617 864 ntBASIC13.3□□□□□ -0.28
Scn9aQ62205 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Scn9aQ62205 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Scn9aQ62205 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC13.3□□□□□ -0.28
Scn9aQ62205 Gm29543-201ENSMUST00000188138 967 ntBASIC13.3□□□□□ -0.28
Scn9aQ62205 Gm8643-201ENSMUST00000195228 625 ntBASIC13.3□□□□□ -0.28
Scn9aQ62205 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC13.3□□□□□ -0.28
Scn9aQ62205 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC13.3□□□□□ -0.28
Scn9aQ62205 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn9aQ62205 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
Scn9aQ62205 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn9aQ62205 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scn9aQ62205 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn9aQ62205 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn9aQ62205 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn9aQ62205 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn9aQ62205 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Scn9aQ62205 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Scn9aQ62205 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Scn9aQ62205 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn9aQ62205 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn9aQ62205 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn9aQ62205 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn9aQ62205 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Scn9aQ62205 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn9aQ62205 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn9aQ62205 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn9aQ62205 Gm12345-201ENSMUST00000119288 898 ntBASIC13.29□□□□□ -0.28
Scn9aQ62205 Mup-ps29-201ENSMUST00000122281 202 ntBASIC13.29□□□□□ -0.28
Scn9aQ62205 Gm20694-201ENSMUST00000176943 404 ntBASIC13.29□□□□□ -0.28
Scn9aQ62205 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn9aQ62205 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn9aQ62205 Gm44498-201ENSMUST00000199509 111 ntBASIC13.29□□□□□ -0.28
Scn9aQ62205 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC13.29□□□□□ -0.28
Scn9aQ62205 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC13.29□□□□□ -0.28
Scn9aQ62205 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn9aQ62205 Gm5040-201ENSMUST00000218609 800 ntBASIC13.29□□□□□ -0.28
Scn9aQ62205 AC103672.1-201ENSMUST00000227502 365 ntBASIC13.29□□□□□ -0.28
Scn9aQ62205 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn9aQ62205 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Scn9aQ62205 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn9aQ62205 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn9aQ62205 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Scn9aQ62205 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Scn9aQ62205 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC13.29□□□□□ -0.28
Scn9aQ62205 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn9aQ62205 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn9aQ62205 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn9aQ62205 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Scn9aQ62205 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn9aQ62205 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn9aQ62205 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn9aQ62205 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn9aQ62205 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.29□□□□□ -0.28
Scn9aQ62205 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn9aQ62205 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn9aQ62205 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn9aQ62205 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn9aQ62205 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn9aQ62205 Gm12736-201ENSMUST00000119330 236 ntBASIC13.29□□□□□ -0.28
Scn9aQ62205 Snord55-201ENSMUST00000174939 79 ntBASIC13.29□□□□□ -0.28
Scn9aQ62205 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Scn9aQ62205 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC13.29□□□□□ -0.28
Scn9aQ62205 Gm6677-201ENSMUST00000195100 441 ntBASIC13.29□□□□□ -0.28
Scn9aQ62205 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn9aQ62205 CT010505.2-201ENSMUST00000227918 998 ntBASIC13.29□□□□□ -0.28
Scn9aQ62205 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Scn9aQ62205 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Scn9aQ62205 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn9aQ62205 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn9aQ62205 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn9aQ62205 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn9aQ62205 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn9aQ62205 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scn9aQ62205 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms