Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Gm38301-201ENSMUST00000195573 543 ntBASIC11.63□□□□□ -0.55
Bdp1Q571C7 Gm42821-201ENSMUST00000199771 489 ntBASIC11.63□□□□□ -0.55
Bdp1Q571C7 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Bdp1Q571C7 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC11.63□□□□□ -0.55
Bdp1Q571C7 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.63□□□□□ -0.55
Bdp1Q571C7 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.63□□□□□ -0.55
Bdp1Q571C7 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Bdp1Q571C7 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Bdp1Q571C7 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Bdp1Q571C7 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Bdp1Q571C7 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Bdp1Q571C7 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Bdp1Q571C7 AC151836.1-201ENSMUST00000228730 1637 ntBASIC11.62□□□□□ -0.55
Bdp1Q571C7 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Gm11960-202ENSMUST00000181063 2858 ntBASIC11.62□□□□□ -0.55
Bdp1Q571C7 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Epp13-201ENSMUST00000121024 957 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Bdp1Q571C7 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Gm16280-201ENSMUST00000162458 623 ntTSL 3 BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Gm26943-201ENSMUST00000182295 957 ntBASIC11.62□□□□□ -0.55
Bdp1Q571C7 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Gm6794-201ENSMUST00000203829 457 ntBASIC11.62□□□□□ -0.55
Bdp1Q571C7 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Bdp1Q571C7 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Bdp1Q571C7 AC132833.1-202ENSMUST00000228875 1690 ntBASIC11.62□□□□□ -0.55
Bdp1Q571C7 Klf10-203ENSMUST00000227920 2144 ntBASIC11.62□□□□□ -0.55
Bdp1Q571C7 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Bdp1Q571C7 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.62□□□□□ -0.55
Bdp1Q571C7 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Gm24066-201ENSMUST00000104515 131 ntBASIC11.62□□□□□ -0.55
Bdp1Q571C7 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Gm14071-201ENSMUST00000117817 509 ntBASIC11.62□□□□□ -0.55
Bdp1Q571C7 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Gm18555-201ENSMUST00000197935 584 ntBASIC11.62□□□□□ -0.55
Bdp1Q571C7 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Bdp1Q571C7 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Bdp1Q571C7 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.62□□□□□ -0.55
Bdp1Q571C7 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Bdp1Q571C7 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Bdp1Q571C7 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Bdp1Q571C7 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.61□□□□□ -0.55
Bdp1Q571C7 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Bdp1Q571C7 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Bdp1Q571C7 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Bdp1Q571C7 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Bdp1Q571C7 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Bdp1Q571C7 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Bdp1Q571C7 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Bdp1Q571C7 Gm13777-201ENSMUST00000118208 345 ntBASIC11.61□□□□□ -0.55
Bdp1Q571C7 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC11.61□□□□□ -0.55
Bdp1Q571C7 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC11.61□□□□□ -0.55
Bdp1Q571C7 Rpl17-ps11-201ENSMUST00000161946 729 ntBASIC11.61□□□□□ -0.55
Bdp1Q571C7 Gm7445-201ENSMUST00000192115 340 ntBASIC11.61□□□□□ -0.55
Bdp1Q571C7 Gm44908-201ENSMUST00000208610 266 ntBASIC11.61□□□□□ -0.55
Bdp1Q571C7 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Bdp1Q571C7 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Bdp1Q571C7 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Bdp1Q571C7 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.61□□□□□ -0.55
Bdp1Q571C7 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Bdp1Q571C7 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.61□□□□□ -0.55
Bdp1Q571C7 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.61□□□□□ -0.55
Bdp1Q571C7 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Bdp1Q571C7 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Bdp1Q571C7 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Bdp1Q571C7 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Bdp1Q571C7 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Bdp1Q571C7 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms