Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Upk2P38575 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Upk2P38575 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Upk2P38575 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Upk2P38575 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.05□□□□□ -0.8
Upk2P38575 Gm7993-201ENSMUST00000200970 1384 ntBASIC10.05□□□□□ -0.8
Upk2P38575 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Upk2P38575 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.05□□□□□ -0.8
Upk2P38575 Gm44663-201ENSMUST00000206898 3150 ntBASIC10.05□□□□□ -0.8
Upk2P38575 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Upk2P38575 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Upk2P38575 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Upk2P38575 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Upk2P38575 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Upk2P38575 Gm14193-201ENSMUST00000105067 153 ntBASIC10.05□□□□□ -0.8
Upk2P38575 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Upk2P38575 Gm15236-201ENSMUST00000117309 379 ntBASIC10.05□□□□□ -0.8
Upk2P38575 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC10.05□□□□□ -0.8
Upk2P38575 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Upk2P38575 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Upk2P38575 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Upk2P38575 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Upk2P38575 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC10.05□□□□□ -0.8
Upk2P38575 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Upk2P38575 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC10.05□□□□□ -0.8
Upk2P38575 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Upk2P38575 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Upk2P38575 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Upk2P38575 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Upk2P38575 Gm18056-201ENSMUST00000207670 568 ntBASIC10.05□□□□□ -0.8
Upk2P38575 Gm18061-201ENSMUST00000208350 562 ntBASIC10.05□□□□□ -0.8
Upk2P38575 Gm18063-201ENSMUST00000208529 568 ntBASIC10.05□□□□□ -0.8
Upk2P38575 Gm18052-201ENSMUST00000208750 559 ntBASIC10.05□□□□□ -0.8
Upk2P38575 Gm45856-201ENSMUST00000212752 416 ntBASIC10.05□□□□□ -0.8
Upk2P38575 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC10.05□□□□□ -0.8
Upk2P38575 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Upk2P38575 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Upk2P38575 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Upk2P38575 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Upk2P38575 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Upk2P38575 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Upk2P38575 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Upk2P38575 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Upk2P38575 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Upk2P38575 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Upk2P38575 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Upk2P38575 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Upk2P38575 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Upk2P38575 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.05□□□□□ -0.8
Upk2P38575 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Upk2P38575 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Upk2P38575 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Upk2P38575 Gm28424-201ENSMUST00000187393 1319 ntBASIC10.05□□□□□ -0.8
Upk2P38575 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Upk2P38575 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Upk2P38575 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Upk2P38575 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Upk2P38575 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Upk2P38575 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Upk2P38575 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Upk2P38575 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.05□□□□□ -0.8
Upk2P38575 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Upk2P38575 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Upk2P38575 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.04□□□□□ -0.8
Upk2P38575 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Upk2P38575 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Upk2P38575 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Upk2P38575 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Upk2P38575 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Upk2P38575 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Upk2P38575 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.04□□□□□ -0.8
Upk2P38575 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Upk2P38575 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Upk2P38575 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Upk2P38575 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Upk2P38575 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Upk2P38575 Gm12217-201ENSMUST00000118858 696 ntBASIC10.04□□□□□ -0.8
Upk2P38575 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.04□□□□□ -0.8
Upk2P38575 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC10.04□□□□□ -0.8
Upk2P38575 Gm24844-201ENSMUST00000158679 127 ntBASIC10.04□□□□□ -0.8
Upk2P38575 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC10.04□□□□□ -0.8
Upk2P38575 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Upk2P38575 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Upk2P38575 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC10.04□□□□□ -0.8
Upk2P38575 Gm38319-201ENSMUST00000194537 1266 ntBASIC10.04□□□□□ -0.8
Upk2P38575 Gm44506-201ENSMUST00000206278 965 ntBASIC10.04□□□□□ -0.8
Upk2P38575 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Upk2P38575 Gm8342-201ENSMUST00000209839 757 ntBASIC10.04□□□□□ -0.8
Upk2P38575 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC10.04□□□□□ -0.8
Upk2P38575 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Upk2P38575 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC10.04□□□□□ -0.8
Upk2P38575 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC10.04□□□□□ -0.8
Upk2P38575 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Upk2P38575 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Upk2P38575 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC10.04□□□□□ -0.8
Upk2P38575 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Upk2P38575 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Upk2P38575 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Upk2P38575 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Upk2P38575 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms