Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
RxrbP28704 Gm43482-201ENSMUST00000202797 1861 ntBASIC11.53□□□□□ -0.56
RxrbP28704 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
RxrbP28704 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC11.53□□□□□ -0.56
RxrbP28704 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
RxrbP28704 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
RxrbP28704 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
RxrbP28704 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
RxrbP28704 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC11.52□□□□□ -0.56
RxrbP28704 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.52□□□□□ -0.56
RxrbP28704 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
RxrbP28704 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
RxrbP28704 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
RxrbP28704 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
RxrbP28704 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
RxrbP28704 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
RxrbP28704 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
RxrbP28704 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RxrbP28704 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
RxrbP28704 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RxrbP28704 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
RxrbP28704 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RxrbP28704 Gm11989-201ENSMUST00000117240 672 ntBASIC11.52□□□□□ -0.57
RxrbP28704 Gm12957-201ENSMUST00000117835 377 ntBASIC11.52□□□□□ -0.57
RxrbP28704 Gm12241-201ENSMUST00000118330 726 ntBASIC11.52□□□□□ -0.57
RxrbP28704 Gm11362-201ENSMUST00000118838 850 ntBASIC11.52□□□□□ -0.57
RxrbP28704 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.52□□□□□ -0.57
RxrbP28704 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
RxrbP28704 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.52□□□□□ -0.57
RxrbP28704 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RxrbP28704 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
RxrbP28704 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.52□□□□□ -0.57
RxrbP28704 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RxrbP28704 Gm19187-201ENSMUST00000206781 892 ntBASIC11.52□□□□□ -0.57
RxrbP28704 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.52□□□□□ -0.57
RxrbP28704 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RxrbP28704 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RxrbP28704 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RxrbP28704 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
RxrbP28704 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
RxrbP28704 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
RxrbP28704 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RxrbP28704 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
RxrbP28704 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RxrbP28704 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
RxrbP28704 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RxrbP28704 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RxrbP28704 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
RxrbP28704 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
RxrbP28704 Gm43339-201ENSMUST00000200032 1606 ntBASIC11.52□□□□□ -0.57
RxrbP28704 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
RxrbP28704 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
RxrbP28704 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.52□□□□□ -0.57
RxrbP28704 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC11.52□□□□□ -0.57
RxrbP28704 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
RxrbP28704 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
RxrbP28704 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
RxrbP28704 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
RxrbP28704 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RxrbP28704 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RxrbP28704 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RxrbP28704 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RxrbP28704 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RxrbP28704 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RxrbP28704 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.51□□□□□ -0.57
RxrbP28704 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
RxrbP28704 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RxrbP28704 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC11.51□□□□□ -0.57
RxrbP28704 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
RxrbP28704 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RxrbP28704 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RxrbP28704 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
RxrbP28704 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
RxrbP28704 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RxrbP28704 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
RxrbP28704 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
RxrbP28704 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RxrbP28704 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
RxrbP28704 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
RxrbP28704 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RxrbP28704 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
RxrbP28704 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RxrbP28704 Gm15004-201ENSMUST00000119192 630 ntBASIC11.51□□□□□ -0.57
RxrbP28704 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
RxrbP28704 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.51□□□□□ -0.57
RxrbP28704 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC11.51□□□□□ -0.57
RxrbP28704 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.51□□□□□ -0.57
RxrbP28704 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.51□□□□□ -0.57
RxrbP28704 Gm31256-201ENSMUST00000194705 506 ntBASIC11.51□□□□□ -0.57
RxrbP28704 Gm32111-201ENSMUST00000207689 846 ntBASIC11.51□□□□□ -0.57
RxrbP28704 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.51□□□□□ -0.57
RxrbP28704 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.51□□□□□ -0.57
RxrbP28704 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.51□□□□□ -0.57
RxrbP28704 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.51□□□□□ -0.57
RxrbP28704 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RxrbP28704 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RxrbP28704 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.51□□□□□ -0.57
RxrbP28704 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
RxrbP28704 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.51□□□□□ -0.57
RxrbP28704 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms