Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Gm15004-201ENSMUST00000119192 630 ntBASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Gm15547-201ENSMUST00000122152 333 ntBASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Gm6963-201ENSMUST00000147879 379 ntBASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Gm5455-201ENSMUST00000058710 715 ntBASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.28□□□□□ -0.6
Trim8Q99PJ2 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim8Q99PJ2 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Trim8Q99PJ2 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim8Q99PJ2 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trim8Q99PJ2 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC11.27□□□□□ -0.6
Trim8Q99PJ2 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim8Q99PJ2 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim8Q99PJ2 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.27□□□□□ -0.6
Trim8Q99PJ2 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim8Q99PJ2 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim8Q99PJ2 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim8Q99PJ2 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim8Q99PJ2 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Trim8Q99PJ2 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trim8Q99PJ2 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC11.27□□□□□ -0.61
Trim8Q99PJ2 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.27□□□□□ -0.61
Trim8Q99PJ2 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim8Q99PJ2 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.27□□□□□ -0.61
Trim8Q99PJ2 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim8Q99PJ2 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.27□□□□□ -0.61
Trim8Q99PJ2 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.27□□□□□ -0.61
Trim8Q99PJ2 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim8Q99PJ2 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.27□□□□□ -0.61
Trim8Q99PJ2 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.27□□□□□ -0.61
Trim8Q99PJ2 Gm9257-201ENSMUST00000221254 232 ntBASIC11.27□□□□□ -0.61
Trim8Q99PJ2 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim8Q99PJ2 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.27□□□□□ -0.61
Trim8Q99PJ2 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.27□□□□□ -0.61
Trim8Q99PJ2 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Trim8Q99PJ2 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim8Q99PJ2 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim8Q99PJ2 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trim8Q99PJ2 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim8Q99PJ2 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim8Q99PJ2 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.27□□□□□ -0.61
Trim8Q99PJ2 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim8Q99PJ2 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim8Q99PJ2 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim8Q99PJ2 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim8Q99PJ2 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trim8Q99PJ2 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim8Q99PJ2 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim8Q99PJ2 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim8Q99PJ2 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms