Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Gm4978-201ENSMUST00000071565 801 ntBASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.87□□□□□ -0.67
Nkx6-1Q99MA9 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Mir453-201ENSMUST00000104732 82 ntBASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Gm11957-201ENSMUST00000118304 779 ntBASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Gm14395-201ENSMUST00000120494 563 ntBASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Mir1905-201ENSMUST00000122779 82 ntBASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Gm4895-201ENSMUST00000181646 1137 ntBASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Gm42430-201ENSMUST00000197209 616 ntBASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Gm17825-201ENSMUST00000206836 794 ntBASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx6-1Q99MA9 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx6-1Q99MA9 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms