Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 Gm6023-201ENSMUST00000118217 606 ntBASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 Gm5950-201ENSMUST00000213337 772 ntBASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ccdc28bQ8CEG5 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc28bQ8CEG5 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.36□□□□□ -0.59
Ccdc28bQ8CEG5 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Ccdc28bQ8CEG5 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Ccdc28bQ8CEG5 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc28bQ8CEG5 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Ccdc28bQ8CEG5 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc28bQ8CEG5 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc28bQ8CEG5 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc28bQ8CEG5 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Ccdc28bQ8CEG5 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Ccdc28bQ8CEG5 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Ccdc28bQ8CEG5 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc28bQ8CEG5 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.36□□□□□ -0.59
Ccdc28bQ8CEG5 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Ccdc28bQ8CEG5 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.36□□□□□ -0.59
Ccdc28bQ8CEG5 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.36□□□□□ -0.59
Ccdc28bQ8CEG5 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc28bQ8CEG5 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.36□□□□□ -0.59
Ccdc28bQ8CEG5 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc28bQ8CEG5 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Ccdc28bQ8CEG5 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc28bQ8CEG5 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.36□□□□□ -0.59
Ccdc28bQ8CEG5 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc28bQ8CEG5 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc28bQ8CEG5 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Ccdc28bQ8CEG5 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc28bQ8CEG5 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc28bQ8CEG5 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Ccdc28bQ8CEG5 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc28bQ8CEG5 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Ccdc28bQ8CEG5 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc28bQ8CEG5 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc28bQ8CEG5 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Ccdc28bQ8CEG5 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc28bQ8CEG5 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ccdc28bQ8CEG5 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.35□□□□□ -0.59
Ccdc28bQ8CEG5 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc28bQ8CEG5 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc28bQ8CEG5 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC11.35□□□□□ -0.59
Ccdc28bQ8CEG5 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Ccdc28bQ8CEG5 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc28bQ8CEG5 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc28bQ8CEG5 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC11.35□□□□□ -0.59
Ccdc28bQ8CEG5 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc28bQ8CEG5 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc28bQ8CEG5 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc28bQ8CEG5 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Ccdc28bQ8CEG5 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Ccdc28bQ8CEG5 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc28bQ8CEG5 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Ccdc28bQ8CEG5 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc28bQ8CEG5 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc28bQ8CEG5 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc28bQ8CEG5 Gm14644-201ENSMUST00000116671 647 ntBASIC11.35□□□□□ -0.59
Ccdc28bQ8CEG5 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc28bQ8CEG5 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc28bQ8CEG5 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc28bQ8CEG5 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.35□□□□□ -0.59
Ccdc28bQ8CEG5 Gm18065-201ENSMUST00000221395 526 ntBASIC11.35□□□□□ -0.59
Ccdc28bQ8CEG5 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.35□□□□□ -0.59
Ccdc28bQ8CEG5 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc28bQ8CEG5 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc28bQ8CEG5 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
Ccdc28bQ8CEG5 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc28bQ8CEG5 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Ccdc28bQ8CEG5 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc28bQ8CEG5 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms