Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ttc28Q80XJ3 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Ttc28Q80XJ3 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Ttc28Q80XJ3 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
Ttc28Q80XJ3 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Ttc28Q80XJ3 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
Ttc28Q80XJ3 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.87
Ttc28Q80XJ3 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Ttc28Q80XJ3 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Ttc28Q80XJ3 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Ttc28Q80XJ3 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Ttc28Q80XJ3 Gm44292-201ENSMUST00000205194 2364 ntBASIC9.65□□□□□ -0.87
Ttc28Q80XJ3 Gm37644-201ENSMUST00000192190 2270 ntBASIC9.65□□□□□ -0.87
Ttc28Q80XJ3 Gm7002-201ENSMUST00000221386 2165 ntBASIC9.65□□□□□ -0.87
Ttc28Q80XJ3 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Ttc28Q80XJ3 AC138329.2-201ENSMUST00000225579 1842 ntBASIC9.65□□□□□ -0.87
Ttc28Q80XJ3 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Gm5308-201ENSMUST00000196752 1354 ntBASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Gm12461-201ENSMUST00000120231 1239 ntBASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Gm17221-201ENSMUST00000163909 481 ntBASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Gm17073-201ENSMUST00000168069 556 ntBASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 AC115304.2-201ENSMUST00000226399 332 ntBASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Gm20554-201ENSMUST00000177421 2352 ntBASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Gm37861-201ENSMUST00000193534 2869 ntBASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Gm27196-201ENSMUST00000184787 2582 ntBASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Gm16547-201ENSMUST00000159474 293 ntBASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Gm9372-201ENSMUST00000168454 430 ntBASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Gm43564-201ENSMUST00000196185 211 ntBASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Gm17936-201ENSMUST00000199413 988 ntBASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Gm9644-201ENSMUST00000212828 1183 ntBASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Gm5178-201ENSMUST00000219380 898 ntBASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Gm37912-201ENSMUST00000191895 3076 ntBASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ttc28Q80XJ3 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ttc28Q80XJ3 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Ttc28Q80XJ3 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ttc28Q80XJ3 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ttc28Q80XJ3 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ttc28Q80XJ3 4933428M09Rik-201ENSMUST00000113046 1026 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ttc28Q80XJ3 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ttc28Q80XJ3 Gm22763-201ENSMUST00000158374 107 ntBASIC9.63□□□□□ -0.87
Ttc28Q80XJ3 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ttc28Q80XJ3 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC9.63□□□□□ -0.87
Ttc28Q80XJ3 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms