Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Gm11500-201ENSMUST00000118237 601 ntBASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Gm7504-201ENSMUST00000201449 424 ntBASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Gm18363-201ENSMUST00000221671 730 ntBASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Paupar-201ENSMUST00000194826 3482 ntBASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Gm13384-201ENSMUST00000117166 1344 ntBASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Pcdh19Q80TF3 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Pcdh19Q80TF3 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Gm23272-201ENSMUST00000104053 129 ntBASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Gm14942-201ENSMUST00000119642 336 ntBASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Gm13182-201ENSMUST00000122241 312 ntBASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Gm35960-201ENSMUST00000202712 767 ntBASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Gm5996-201ENSMUST00000211110 718 ntBASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 BC043934-202ENSMUST00000185694 2356 ntBASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh19Q80TF3 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdh19Q80TF3 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms