Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Nr1h4Q60641 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.97□□□□□ -0.65
Nr1h4Q60641 Gm11425-201ENSMUST00000119608 498 ntBASIC10.97□□□□□ -0.65
Nr1h4Q60641 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nr1h4Q60641 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nr1h4Q60641 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC10.97□□□□□ -0.65
Nr1h4Q60641 Gm5070-201ENSMUST00000177599 862 ntBASIC10.97□□□□□ -0.65
Nr1h4Q60641 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.97□□□□□ -0.65
Nr1h4Q60641 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nr1h4Q60641 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nr1h4Q60641 Gm45880-201ENSMUST00000213041 853 ntBASIC10.97□□□□□ -0.65
Nr1h4Q60641 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nr1h4Q60641 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Nr1h4Q60641 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.97□□□□□ -0.65
Nr1h4Q60641 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nr1h4Q60641 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nr1h4Q60641 Gm9396-201ENSMUST00000076703 567 ntBASIC10.97□□□□□ -0.65
Nr1h4Q60641 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nr1h4Q60641 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nr1h4Q60641 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nr1h4Q60641 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC10.97□□□□□ -0.65
Nr1h4Q60641 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC10.97□□□□□ -0.65
Nr1h4Q60641 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.97□□□□□ -0.65
Nr1h4Q60641 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Nr1h4Q60641 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.97□□□□□ -0.65
Nr1h4Q60641 Casc1-208ENSMUST00000204105 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nr1h4Q60641 Gm4454-201ENSMUST00000190585 2578 ntBASIC10.97□□□□□ -0.65
Nr1h4Q60641 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nr1h4Q60641 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.97□□□□□ -0.65
Nr1h4Q60641 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nr1h4Q60641 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
Nr1h4Q60641 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nr1h4Q60641 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nr1h4Q60641 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Nr1h4Q60641 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nr1h4Q60641 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nr1h4Q60641 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nr1h4Q60641 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.96□□□□□ -0.65
Nr1h4Q60641 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nr1h4Q60641 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nr1h4Q60641 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Nr1h4Q60641 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nr1h4Q60641 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nr1h4Q60641 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.96□□□□□ -0.65
Nr1h4Q60641 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Nr1h4Q60641 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.96□□□□□ -0.65
Nr1h4Q60641 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nr1h4Q60641 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Nr1h4Q60641 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nr1h4Q60641 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nr1h4Q60641 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nr1h4Q60641 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nr1h4Q60641 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Nr1h4Q60641 Gm11500-201ENSMUST00000118237 601 ntBASIC10.96□□□□□ -0.65
Nr1h4Q60641 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC10.96□□□□□ -0.65
Nr1h4Q60641 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC10.96□□□□□ -0.65
Nr1h4Q60641 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC10.96□□□□□ -0.65
Nr1h4Q60641 Gm18187-201ENSMUST00000196476 984 ntBASIC10.96□□□□□ -0.65
Nr1h4Q60641 Gm6439-201ENSMUST00000199849 862 ntBASIC10.96□□□□□ -0.65
Nr1h4Q60641 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.96□□□□□ -0.65
Nr1h4Q60641 Gm45598-202ENSMUST00000210719 986 ntBASIC10.96□□□□□ -0.65
Nr1h4Q60641 Gm10608-202ENSMUST00000213924 676 ntBASIC10.96□□□□□ -0.65
Nr1h4Q60641 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nr1h4Q60641 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nr1h4Q60641 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nr1h4Q60641 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nr1h4Q60641 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nr1h4Q60641 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nr1h4Q60641 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nr1h4Q60641 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nr1h4Q60641 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Nr1h4Q60641 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nr1h4Q60641 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Nr1h4Q60641 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nr1h4Q60641 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Nr1h4Q60641 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Nr1h4Q60641 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nr1h4Q60641 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Nr1h4Q60641 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nr1h4Q60641 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nr1h4Q60641 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Nr1h4Q60641 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nr1h4Q60641 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nr1h4Q60641 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Nr1h4Q60641 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.95□□□□□ -0.66
Nr1h4Q60641 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms