Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fam196aQ3USH1 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.61□□□□□ -0.55
Fam196aQ3USH1 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fam196aQ3USH1 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fam196aQ3USH1 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.61□□□□□ -0.55
Fam196aQ3USH1 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fam196aQ3USH1 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fam196aQ3USH1 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Fam196aQ3USH1 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Fam196aQ3USH1 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fam196aQ3USH1 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fam196aQ3USH1 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fam196aQ3USH1 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fam196aQ3USH1 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Fam196aQ3USH1 Gm23132-201ENSMUST00000104254 132 ntBASIC11.61□□□□□ -0.55
Fam196aQ3USH1 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC11.61□□□□□ -0.55
Fam196aQ3USH1 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Fam196aQ3USH1 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Fam196aQ3USH1 Gm38007-201ENSMUST00000192187 313 ntBASIC11.61□□□□□ -0.55
Fam196aQ3USH1 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Fam196aQ3USH1 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.61□□□□□ -0.55
Fam196aQ3USH1 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC11.61□□□□□ -0.55
Fam196aQ3USH1 Gm30055-201ENSMUST00000203175 803 ntBASIC11.61□□□□□ -0.55
Fam196aQ3USH1 Gm44814-201ENSMUST00000207018 434 ntBASIC11.61□□□□□ -0.55
Fam196aQ3USH1 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Fam196aQ3USH1 AC115304.2-201ENSMUST00000226399 332 ntBASIC11.61□□□□□ -0.55
Fam196aQ3USH1 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Fam196aQ3USH1 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Fam196aQ3USH1 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Fam196aQ3USH1 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Fam196aQ3USH1 Gm6024-201ENSMUST00000117850 1558 ntBASIC11.61□□□□□ -0.55
Fam196aQ3USH1 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fam196aQ3USH1 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fam196aQ3USH1 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.61□□□□□ -0.55
Fam196aQ3USH1 Cog3-203ENSMUST00000227473 4197 ntBASIC11.61□□□□□ -0.55
Fam196aQ3USH1 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fam196aQ3USH1 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fam196aQ3USH1 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fam196aQ3USH1 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Fam196aQ3USH1 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Fam196aQ3USH1 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Prss23os-202ENSMUST00000179361 1362 ntBASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Gm42970-201ENSMUST00000196407 1352 ntBASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Gm23604-201ENSMUST00000104311 132 ntBASIC11.6□□□□□ -0.55
Fam196aQ3USH1 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Gm26119-201ENSMUST00000175601 104 ntBASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Gm44323-201ENSMUST00000198689 129 ntBASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Gm17936-201ENSMUST00000199413 988 ntBASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Gm43866-201ENSMUST00000203894 839 ntBASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 AC121567.1-201ENSMUST00000227213 842 ntBASIC11.6□□□□□ -0.55
Fam196aQ3USH1 AC103672.1-201ENSMUST00000227502 365 ntBASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Fam196aQ3USH1 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.59□□□□□ -0.55
Fam196aQ3USH1 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Fam196aQ3USH1 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Fam196aQ3USH1 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms