Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a1P61620 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a1P61620 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Sec61a1P61620 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Sec61a1P61620 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a1P61620 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC10.16□□□□□ -0.78
Sec61a1P61620 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a1P61620 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a1P61620 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a1P61620 Gm24934-201ENSMUST00000103764 111 ntBASIC10.16□□□□□ -0.78
Sec61a1P61620 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.16□□□□□ -0.78
Sec61a1P61620 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a1P61620 Gm12015-201ENSMUST00000117065 843 ntBASIC10.16□□□□□ -0.78
Sec61a1P61620 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a1P61620 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Sec61a1P61620 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a1P61620 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.16□□□□□ -0.78
Sec61a1P61620 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.16□□□□□ -0.78
Sec61a1P61620 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.16□□□□□ -0.78
Sec61a1P61620 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a1P61620 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a1P61620 Gm8913-201ENSMUST00000209491 641 ntBASIC10.16□□□□□ -0.78
Sec61a1P61620 Gm45598-202ENSMUST00000210719 986 ntBASIC10.16□□□□□ -0.78
Sec61a1P61620 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC10.16□□□□□ -0.78
Sec61a1P61620 Gm18212-201ENSMUST00000211678 889 ntBASIC10.16□□□□□ -0.78
Sec61a1P61620 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.16□□□□□ -0.78
Sec61a1P61620 AC163667.3-201ENSMUST00000225774 222 ntBASIC10.16□□□□□ -0.78
Sec61a1P61620 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a1P61620 Gm8385-201ENSMUST00000058999 643 ntBASIC10.16□□□□□ -0.78
Sec61a1P61620 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a1P61620 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a1P61620 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a1P61620 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a1P61620 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Sec61a1P61620 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Sec61a1P61620 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a1P61620 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a1P61620 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Sec61a1P61620 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.16□□□□□ -0.78
Sec61a1P61620 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC10.16□□□□□ -0.78
Sec61a1P61620 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a1P61620 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a1P61620 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a1P61620 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a1P61620 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a1P61620 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a1P61620 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a1P61620 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC10.16□□□□□ -0.78
Sec61a1P61620 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sec61a1P61620 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Sec61a1P61620 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Sec61a1P61620 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sec61a1P61620 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Sec61a1P61620 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC10.15□□□□□ -0.78
Sec61a1P61620 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC10.15□□□□□ -0.78
Sec61a1P61620 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sec61a1P61620 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Sec61a1P61620 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Sec61a1P61620 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sec61a1P61620 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sec61a1P61620 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Sec61a1P61620 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sec61a1P61620 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sec61a1P61620 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sec61a1P61620 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sec61a1P61620 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Sec61a1P61620 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC10.15□□□□□ -0.78
Sec61a1P61620 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sec61a1P61620 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sec61a1P61620 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sec61a1P61620 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Sec61a1P61620 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Sec61a1P61620 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Sec61a1P61620 Gm23912-201ENSMUST00000104687 87 ntBASIC10.15□□□□□ -0.78
Sec61a1P61620 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Sec61a1P61620 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC10.15□□□□□ -0.78
Sec61a1P61620 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
Sec61a1P61620 Gm14028-201ENSMUST00000117434 479 ntBASIC10.15□□□□□ -0.78
Sec61a1P61620 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
Sec61a1P61620 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Sec61a1P61620 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.15□□□□□ -0.78
Sec61a1P61620 Rps4l-202ENSMUST00000204242 789 ntBASIC10.15□□□□□ -0.78
Sec61a1P61620 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Sec61a1P61620 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC10.15□□□□□ -0.78
Sec61a1P61620 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Sec61a1P61620 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sec61a1P61620 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sec61a1P61620 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sec61a1P61620 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sec61a1P61620 Gm9996-201ENSMUST00000070359 913 ntBASIC10.15□□□□□ -0.78
Sec61a1P61620 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sec61a1P61620 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Sec61a1P61620 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sec61a1P61620 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC10.15□□□□□ -0.78
Sec61a1P61620 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Sec61a1P61620 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sec61a1P61620 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sec61a1P61620 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sec61a1P61620 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Sec61a1P61620 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms