Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Cdkn1aP39689 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Cdkn1aP39689 AC164426.2-201ENSMUST00000225993 2492 ntBASIC9.49□□□□□ -0.89
Cdkn1aP39689 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC9.49□□□□□ -0.89
Cdkn1aP39689 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Cdkn1aP39689 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC9.49□□□□□ -0.89
Cdkn1aP39689 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Gm37826-201ENSMUST00000195329 322 ntBASIC9.49□□□□□ -0.89
Cdkn1aP39689 Gm35960-201ENSMUST00000202712 767 ntBASIC9.49□□□□□ -0.89
Cdkn1aP39689 Gm45219-201ENSMUST00000205602 465 ntBASIC9.49□□□□□ -0.89
Cdkn1aP39689 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdkn1aP39689 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Cdkn1aP39689 CT030170.2-201ENSMUST00000223267 126 ntBASIC9.49□□□□□ -0.89
Cdkn1aP39689 CT573047.1-201ENSMUST00000223652 851 ntBASIC9.49□□□□□ -0.89
Cdkn1aP39689 AC124433.1-201ENSMUST00000224483 1063 ntBASIC9.49□□□□□ -0.89
Cdkn1aP39689 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Cdkn1aP39689 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Pck2-205ENSMUST00000226352 2784 ntBASIC9.49□□□□□ -0.89
Cdkn1aP39689 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC9.49□□□□□ -0.89
Cdkn1aP39689 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdkn1aP39689 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Cdkn1aP39689 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC9.48□□□□□ -0.89
Cdkn1aP39689 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC9.48□□□□□ -0.89
Cdkn1aP39689 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Cdkn1aP39689 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdkn1aP39689 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdkn1aP39689 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdkn1aP39689 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Cdkn1aP39689 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Cdkn1aP39689 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Cdkn1aP39689 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Cdkn1aP39689 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Cdkn1aP39689 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdkn1aP39689 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Cdkn1aP39689 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdkn1aP39689 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdkn1aP39689 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Cdkn1aP39689 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdkn1aP39689 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdkn1aP39689 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdkn1aP39689 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdkn1aP39689 Gm26013-201ENSMUST00000104404 119 ntBASIC9.48□□□□□ -0.89
Cdkn1aP39689 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC9.48□□□□□ -0.89
Cdkn1aP39689 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Cdkn1aP39689 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC9.48□□□□□ -0.89
Cdkn1aP39689 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC9.48□□□□□ -0.89
Cdkn1aP39689 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Cdkn1aP39689 Gm18159-201ENSMUST00000174516 1070 ntBASIC9.48□□□□□ -0.89
Cdkn1aP39689 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Cdkn1aP39689 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Cdkn1aP39689 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC9.48□□□□□ -0.89
Cdkn1aP39689 Gm37905-201ENSMUST00000195310 341 ntBASIC9.48□□□□□ -0.89
Cdkn1aP39689 Gm34023-201ENSMUST00000195539 217 ntBASIC9.48□□□□□ -0.89
Cdkn1aP39689 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Cdkn1aP39689 Gm43172-201ENSMUST00000202139 2137 ntBASIC9.48□□□□□ -0.89
Cdkn1aP39689 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC9.48□□□□□ -0.89
Cdkn1aP39689 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC9.48□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms