Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nckap1P28660 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC11.49□□□□□ -0.57
Nckap1P28660 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC11.49□□□□□ -0.57
Nckap1P28660 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC11.49□□□□□ -0.57
Nckap1P28660 CT025551.1-201ENSMUST00000223996 692 ntBASIC11.49□□□□□ -0.57
Nckap1P28660 AC102368.1-201ENSMUST00000227161 892 ntBASIC11.49□□□□□ -0.57
Nckap1P28660 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nckap1P28660 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nckap1P28660 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nckap1P28660 Gm37859-201ENSMUST00000195529 2173 ntBASIC11.49□□□□□ -0.57
Nckap1P28660 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Nckap1P28660 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Nckap1P28660 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nckap1P28660 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nckap1P28660 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nckap1P28660 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Nckap1P28660 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.49□□□□□ -0.57
Nckap1P28660 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nckap1P28660 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.49□□□□□ -0.57
Nckap1P28660 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nckap1P28660 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nckap1P28660 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nckap1P28660 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nckap1P28660 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.49□□□□□ -0.57
Nckap1P28660 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nckap1P28660 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nckap1P28660 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Nckap1P28660 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nckap1P28660 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nckap1P28660 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nckap1P28660 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nckap1P28660 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.48□□□□□ -0.57
Nckap1P28660 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nckap1P28660 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nckap1P28660 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.48□□□□□ -0.57
Nckap1P28660 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Nckap1P28660 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nckap1P28660 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nckap1P28660 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.48□□□□□ -0.57
Nckap1P28660 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nckap1P28660 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nckap1P28660 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nckap1P28660 Gm11960-201ENSMUST00000122068 925 ntBASIC11.48□□□□□ -0.57
Nckap1P28660 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC11.48□□□□□ -0.57
Nckap1P28660 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nckap1P28660 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC11.48□□□□□ -0.57
Nckap1P28660 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.48□□□□□ -0.57
Nckap1P28660 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nckap1P28660 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Nckap1P28660 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nckap1P28660 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Nckap1P28660 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nckap1P28660 Gm8531-201ENSMUST00000188319 893 ntBASIC11.48□□□□□ -0.57
Nckap1P28660 Gm37826-201ENSMUST00000195329 322 ntBASIC11.48□□□□□ -0.57
Nckap1P28660 Gm5298-201ENSMUST00000201122 892 ntBASIC11.48□□□□□ -0.57
Nckap1P28660 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.48□□□□□ -0.57
Nckap1P28660 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Nckap1P28660 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC11.48□□□□□ -0.57
Nckap1P28660 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nckap1P28660 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nckap1P28660 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Nckap1P28660 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nckap1P28660 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nckap1P28660 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nckap1P28660 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Nckap1P28660 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nckap1P28660 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nckap1P28660 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nckap1P28660 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Nckap1P28660 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Nckap1P28660 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nckap1P28660 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nckap1P28660 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.47□□□□□ -0.57
Nckap1P28660 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.47□□□□□ -0.57
Nckap1P28660 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nckap1P28660 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nckap1P28660 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nckap1P28660 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Nckap1P28660 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Nckap1P28660 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nckap1P28660 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.47□□□□□ -0.57
Nckap1P28660 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nckap1P28660 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Nckap1P28660 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nckap1P28660 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Nckap1P28660 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.47□□□□□ -0.57
Nckap1P28660 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nckap1P28660 Gm14892-201ENSMUST00000117636 267 ntBASIC11.47□□□□□ -0.57
Nckap1P28660 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.47□□□□□ -0.57
Nckap1P28660 Gm13937-201ENSMUST00000121000 988 ntBASIC11.47□□□□□ -0.57
Nckap1P28660 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC11.47□□□□□ -0.57
Nckap1P28660 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.47□□□□□ -0.57
Nckap1P28660 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nckap1P28660 Rn7s6-201ENSMUST00000175005 291 ntBASIC11.47□□□□□ -0.57
Nckap1P28660 Gm26134-201ENSMUST00000178484 110 ntBASIC11.47□□□□□ -0.57
Nckap1P28660 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC11.47□□□□□ -0.57
Nckap1P28660 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC11.47□□□□□ -0.57
Nckap1P28660 Gm19091-201ENSMUST00000208120 978 ntBASIC11.47□□□□□ -0.57
Nckap1P28660 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.47□□□□□ -0.57
Nckap1P28660 Gm18065-201ENSMUST00000221395 526 ntBASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms