Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm43242-201ENSMUST00000199507 1776 ntBASIC8.39□□□□□ -1.07
TcraP01849 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
TcraP01849 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC8.39□□□□□ -1.07
TcraP01849 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC8.39□□□□□ -1.07
TcraP01849 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Gm9035-201ENSMUST00000218318 1697 ntBASIC8.39□□□□□ -1.07
TcraP01849 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Gm45089-201ENSMUST00000208082 2040 ntBASIC8.39□□□□□ -1.07
TcraP01849 Gm8131-201ENSMUST00000213783 1570 ntBASIC8.39□□□□□ -1.07
TcraP01849 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
TcraP01849 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Gm37827-201ENSMUST00000194486 1542 ntBASIC8.39□□□□□ -1.07
TcraP01849 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC8.39□□□□□ -1.07
TcraP01849 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TcraP01849 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TcraP01849 Gm9796-201ENSMUST00000062249 2250 ntBASIC8.38□□□□□ -1.07
TcraP01849 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
TcraP01849 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
TcraP01849 Als2-201ENSMUST00000027178 6342 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TcraP01849 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
TcraP01849 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
TcraP01849 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TcraP01849 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
TcraP01849 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TcraP01849 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
TcraP01849 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC8.38□□□□□ -1.07
TcraP01849 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
TcraP01849 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC8.38□□□□□ -1.07
TcraP01849 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
TcraP01849 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TcraP01849 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
TcraP01849 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC8.38□□□□□ -1.07
TcraP01849 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
TcraP01849 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC8.38□□□□□ -1.07
TcraP01849 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC8.38□□□□□ -1.07
TcraP01849 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC8.38□□□□□ -1.07
TcraP01849 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
TcraP01849 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
TcraP01849 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC8.38□□□□□ -1.07
TcraP01849 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC8.38□□□□□ -1.07
TcraP01849 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TcraP01849 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC8.38□□□□□ -1.07
TcraP01849 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC8.38□□□□□ -1.07
TcraP01849 Gm26927-201ENSMUST00000182385 965 ntBASIC8.38□□□□□ -1.07
TcraP01849 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
TcraP01849 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
TcraP01849 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TcraP01849 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC8.38□□□□□ -1.07
TcraP01849 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC8.38□□□□□ -1.07
TcraP01849 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
TcraP01849 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC8.38□□□□□ -1.07
TcraP01849 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC8.38□□□□□ -1.07
TcraP01849 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC8.38□□□□□ -1.07
TcraP01849 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TcraP01849 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC8.38□□□□□ -1.07
TcraP01849 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TcraP01849 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TcraP01849 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC8.38□□□□□ -1.07
TcraP01849 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TcraP01849 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
TcraP01849 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TcraP01849 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC8.38□□□□□ -1.07
TcraP01849 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
TcraP01849 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
TcraP01849 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
TcraP01849 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TcraP01849 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TcraP01849 Gm28581-201ENSMUST00000186086 2177 ntBASIC8.38□□□□□ -1.07
TcraP01849 Gm44369-201ENSMUST00000204543 2175 ntBASIC8.38□□□□□ -1.07
TcraP01849 Limch1-202ENSMUST00000101164 5192 ntAPPRIS P2 TSL 5 BASIC8.38□□□□□ -1.07
TcraP01849 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TcraP01849 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
TcraP01849 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
TcraP01849 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TcraP01849 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
TcraP01849 Gm44745-201ENSMUST00000206563 2723 ntBASIC8.38□□□□□ -1.07
TcraP01849 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TcraP01849 Gm29245-201ENSMUST00000187332 1416 ntBASIC8.37□□□□□ -1.07
TcraP01849 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
TcraP01849 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TcraP01849 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
TcraP01849 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
TcraP01849 Gm12846-201ENSMUST00000120431 1373 ntBASIC8.37□□□□□ -1.07
TcraP01849 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
TcraP01849 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC8.37□□□□□ -1.07
TcraP01849 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TcraP01849 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC8.37□□□□□ -1.07
TcraP01849 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC8.37□□□□□ -1.07
TcraP01849 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms