Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.83□□□□□ -0.52
Ptch2O35595 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.83□□□□□ -0.52
Ptch2O35595 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ptch2O35595 Gm4978-201ENSMUST00000071565 801 ntBASIC11.83□□□□□ -0.52
Ptch2O35595 Gm23680-201ENSMUST00000083162 164 ntBASIC11.83□□□□□ -0.52
Ptch2O35595 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ptch2O35595 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ptch2O35595 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.83□□□□□ -0.52
Ptch2O35595 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ptch2O35595 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ptch2O35595 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ptch2O35595 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ptch2O35595 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ptch2O35595 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ptch2O35595 Gm8899-201ENSMUST00000214635 1332 ntBASIC11.83□□□□□ -0.52
Ptch2O35595 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.83□□□□□ -0.52
Ptch2O35595 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.83□□□□□ -0.52
Ptch2O35595 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.82□□□□□ -0.52
Ptch2O35595 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ptch2O35595 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.82□□□□□ -0.52
Ptch2O35595 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ptch2O35595 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ptch2O35595 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ptch2O35595 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ptch2O35595 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.82□□□□□ -0.52
Ptch2O35595 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ptch2O35595 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.82□□□□□ -0.52
Ptch2O35595 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ptch2O35595 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ptch2O35595 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ptch2O35595 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ptch2O35595 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ptch2O35595 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.82□□□□□ -0.52
Ptch2O35595 Gm12030-201ENSMUST00000121917 223 ntBASIC11.82□□□□□ -0.52
Ptch2O35595 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ptch2O35595 Gm20495-201ENSMUST00000173902 235 ntBASIC11.82□□□□□ -0.52
Ptch2O35595 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ptch2O35595 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.82□□□□□ -0.52
Ptch2O35595 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ptch2O35595 Gm18561-201ENSMUST00000206027 804 ntBASIC11.82□□□□□ -0.52
Ptch2O35595 Gm45120-201ENSMUST00000208880 408 ntBASIC11.82□□□□□ -0.52
Ptch2O35595 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.82□□□□□ -0.52
Ptch2O35595 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Ptch2O35595 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ptch2O35595 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.82□□□□□ -0.52
Ptch2O35595 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ptch2O35595 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ptch2O35595 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ptch2O35595 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ptch2O35595 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ptch2O35595 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ptch2O35595 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Ptch2O35595 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ptch2O35595 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.82□□□□□ -0.52
Ptch2O35595 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ptch2O35595 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ptch2O35595 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.82□□□□□ -0.52
Ptch2O35595 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ptch2O35595 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ptch2O35595 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ptch2O35595 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
Ptch2O35595 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ptch2O35595 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ptch2O35595 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ptch2O35595 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ptch2O35595 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ptch2O35595 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ptch2O35595 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ptch2O35595 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ptch2O35595 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ptch2O35595 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ptch2O35595 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ptch2O35595 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ptch2O35595 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ptch2O35595 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ptch2O35595 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.81□□□□□ -0.52
Ptch2O35595 Gm11960-201ENSMUST00000122068 925 ntBASIC11.81□□□□□ -0.52
Ptch2O35595 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ptch2O35595 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.81□□□□□ -0.52
Ptch2O35595 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.81□□□□□ -0.52
Ptch2O35595 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC11.81□□□□□ -0.52
Ptch2O35595 AC114645.1-201ENSMUST00000215831 187 ntBASIC11.81□□□□□ -0.52
Ptch2O35595 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ptch2O35595 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ptch2O35595 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ptch2O35595 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Ptch2O35595 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ptch2O35595 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ptch2O35595 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ptch2O35595 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ptch2O35595 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ptch2O35595 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ptch2O35595 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ptch2O35595 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ptch2O35595 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ptch2O35595 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ptch2O35595 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ptch2O35595 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ptch2O35595 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ptch2O35595 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms