Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Scrt1Q99M85 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Scrt1Q99M85 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Scrt1Q99M85 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Scrt1Q99M85 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Scrt1Q99M85 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC10.15□□□□□ -0.78
Scrt1Q99M85 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.15□□□□□ -0.78
Scrt1Q99M85 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Scrt1Q99M85 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Scrt1Q99M85 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Scrt1Q99M85 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Scrt1Q99M85 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.78
Scrt1Q99M85 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.15□□□□□ -0.78
Scrt1Q99M85 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Scrt1Q99M85 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Scrt1Q99M85 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Scrt1Q99M85 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.15□□□□□ -0.78
Scrt1Q99M85 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Scrt1Q99M85 Gm7541-201ENSMUST00000118361 535 ntBASIC10.15□□□□□ -0.78
Scrt1Q99M85 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC10.15□□□□□ -0.78
Scrt1Q99M85 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.15□□□□□ -0.78
Scrt1Q99M85 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Scrt1Q99M85 Gm14760-201ENSMUST00000121831 999 ntBASIC10.15□□□□□ -0.78
Scrt1Q99M85 Gm12030-201ENSMUST00000121917 223 ntBASIC10.15□□□□□ -0.78
Scrt1Q99M85 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC10.15□□□□□ -0.78
Scrt1Q99M85 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Scrt1Q99M85 Gm24844-201ENSMUST00000158679 127 ntBASIC10.15□□□□□ -0.78
Scrt1Q99M85 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Scrt1Q99M85 Gm4862-201ENSMUST00000170405 438 ntBASIC10.15□□□□□ -0.78
Scrt1Q99M85 Gm8815-201ENSMUST00000173809 620 ntBASIC10.15□□□□□ -0.78
Scrt1Q99M85 Gm4310-201ENSMUST00000177847 889 ntBASIC10.15□□□□□ -0.78
Scrt1Q99M85 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC10.15□□□□□ -0.78
Scrt1Q99M85 Gm43610-201ENSMUST00000199117 365 ntBASIC10.15□□□□□ -0.78
Scrt1Q99M85 Gm42599-201ENSMUST00000201308 469 ntBASIC10.15□□□□□ -0.78
Scrt1Q99M85 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC10.15□□□□□ -0.78
Scrt1Q99M85 Gm3017-201ENSMUST00000203603 1126 ntBASIC10.15□□□□□ -0.78
Scrt1Q99M85 Gm44552-201ENSMUST00000205458 1247 ntBASIC10.15□□□□□ -0.78
Scrt1Q99M85 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC10.15□□□□□ -0.78
Scrt1Q99M85 Gm18204-201ENSMUST00000209835 793 ntBASIC10.15□□□□□ -0.78
Scrt1Q99M85 Gm18706-201ENSMUST00000210053 1066 ntBASIC10.15□□□□□ -0.78
Scrt1Q99M85 AC136376.2-201ENSMUST00000228819 490 ntBASIC10.15□□□□□ -0.78
Scrt1Q99M85 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Scrt1Q99M85 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Scrt1Q99M85 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Scrt1Q99M85 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Scrt1Q99M85 Gm8894-201ENSMUST00000074642 666 ntBASIC10.15□□□□□ -0.78
Scrt1Q99M85 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Scrt1Q99M85 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Scrt1Q99M85 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Scrt1Q99M85 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Scrt1Q99M85 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC10.15□□□□□ -0.78
Scrt1Q99M85 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Scrt1Q99M85 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.15□□□□□ -0.78
Scrt1Q99M85 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Scrt1Q99M85 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Scrt1Q99M85 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Scrt1Q99M85 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Scrt1Q99M85 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Scrt1Q99M85 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Scrt1Q99M85 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Scrt1Q99M85 CT009489.1-201ENSMUST00000227740 1893 ntBASIC10.15□□□□□ -0.79
Scrt1Q99M85 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
Scrt1Q99M85 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
Scrt1Q99M85 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Scrt1Q99M85 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Gm18198-201ENSMUST00000204986 1551 ntBASIC10.14□□□□□ -0.79
Scrt1Q99M85 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.14□□□□□ -0.79
Scrt1Q99M85 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Gm22711-201ENSMUST00000116890 133 ntBASIC10.14□□□□□ -0.79
Scrt1Q99M85 Gm15004-201ENSMUST00000119192 630 ntBASIC10.14□□□□□ -0.79
Scrt1Q99M85 Gm15207-201ENSMUST00000119259 442 ntBASIC10.14□□□□□ -0.79
Scrt1Q99M85 Gm12783-201ENSMUST00000121425 397 ntBASIC10.14□□□□□ -0.79
Scrt1Q99M85 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC10.14□□□□□ -0.79
Scrt1Q99M85 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Scrt1Q99M85 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms