Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx54Q8K4L0 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx54Q8K4L0 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx54Q8K4L0 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Ddx54Q8K4L0 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx54Q8K4L0 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx54Q8K4L0 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
Ddx54Q8K4L0 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Ddx54Q8K4L0 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Ddx54Q8K4L0 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Ddx54Q8K4L0 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx54Q8K4L0 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx54Q8K4L0 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ddx54Q8K4L0 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx54Q8K4L0 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC15.04■□□□□ -0
Ddx54Q8K4L0 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx54Q8K4L0 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx54Q8K4L0 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx54Q8K4L0 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Ddx54Q8K4L0 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx54Q8K4L0 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ddx54Q8K4L0 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC15.04■□□□□ -0
Ddx54Q8K4L0 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ddx54Q8K4L0 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ddx54Q8K4L0 Gm17836-201ENSMUST00000191976 1302 ntBASIC15.04■□□□□ -0
Ddx54Q8K4L0 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC15.04■□□□□ -0
Ddx54Q8K4L0 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx54Q8K4L0 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ddx54Q8K4L0 Gm12470-201ENSMUST00000117239 1049 ntBASIC15.04■□□□□ -0
Ddx54Q8K4L0 Gm14071-201ENSMUST00000117817 509 ntBASIC15.04■□□□□ -0
Ddx54Q8K4L0 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC15.04■□□□□ -0
Ddx54Q8K4L0 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ddx54Q8K4L0 Gm26174-201ENSMUST00000158415 219 ntBASIC15.04■□□□□ -0
Ddx54Q8K4L0 Gm16547-201ENSMUST00000159474 293 ntBASIC15.04■□□□□ -0
Ddx54Q8K4L0 Gm4705-201ENSMUST00000177415 354 ntBASIC15.04■□□□□ -0
Ddx54Q8K4L0 Gm43371-201ENSMUST00000202838 1031 ntBASIC15.04■□□□□ -0
Ddx54Q8K4L0 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx54Q8K4L0 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx54Q8K4L0 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC15.04■□□□□ -0
Ddx54Q8K4L0 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx54Q8K4L0 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx54Q8K4L0 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ddx54Q8K4L0 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx54Q8K4L0 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx54Q8K4L0 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx54Q8K4L0 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ddx54Q8K4L0 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx54Q8K4L0 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx54Q8K4L0 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx54Q8K4L0 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx54Q8K4L0 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ddx54Q8K4L0 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx54Q8K4L0 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx54Q8K4L0 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx54Q8K4L0 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx54Q8K4L0 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ddx54Q8K4L0 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ddx54Q8K4L0 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx54Q8K4L0 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ddx54Q8K4L0 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx54Q8K4L0 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Ddx54Q8K4L0 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC15.03■□□□□ -0
Ddx54Q8K4L0 Gm16209-201ENSMUST00000118457 627 ntBASIC15.03■□□□□ -0
Ddx54Q8K4L0 Gm15172-201ENSMUST00000118945 1046 ntBASIC15.03■□□□□ -0
Ddx54Q8K4L0 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC15.03■□□□□ -0
Ddx54Q8K4L0 Gm10171-201ENSMUST00000126220 628 ntBASIC15.03■□□□□ -0
Ddx54Q8K4L0 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC15.03■□□□□ -0
Ddx54Q8K4L0 Gm23582-201ENSMUST00000158530 139 ntBASIC15.03■□□□□ -0
Ddx54Q8K4L0 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ddx54Q8K4L0 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC15.03■□□□□ -0
Ddx54Q8K4L0 Gm19918-201ENSMUST00000194858 400 ntBASIC15.03■□□□□ -0
Ddx54Q8K4L0 Gm43460-201ENSMUST00000202491 1057 ntBASIC15.03■□□□□ -0
Ddx54Q8K4L0 Gm43997-201ENSMUST00000203986 1005 ntBASIC15.03■□□□□ -0
Ddx54Q8K4L0 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx54Q8K4L0 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC15.03■□□□□ -0
Ddx54Q8K4L0 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC15.03■□□□□ -0
Ddx54Q8K4L0 AC134601.2-201ENSMUST00000221071 130 ntBASIC15.03■□□□□ -0
Ddx54Q8K4L0 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Ddx54Q8K4L0 Gm10233-201ENSMUST00000089275 628 ntBASIC15.03■□□□□ -0
Ddx54Q8K4L0 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx54Q8K4L0 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx54Q8K4L0 AC123834.1-201ENSMUST00000225346 2043 ntBASIC15.03■□□□□ -0
Ddx54Q8K4L0 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ddx54Q8K4L0 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx54Q8K4L0 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ddx54Q8K4L0 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx54Q8K4L0 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx54Q8K4L0 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ddx54Q8K4L0 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ddx54Q8K4L0 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx54Q8K4L0 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx54Q8K4L0 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx54Q8K4L0 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx54Q8K4L0 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx54Q8K4L0 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx54Q8K4L0 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx54Q8K4L0 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC15.02■□□□□ -0
Ddx54Q8K4L0 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx54Q8K4L0 Gm24933-201ENSMUST00000103762 110 ntBASIC15.02■□□□□ -0
Ddx54Q8K4L0 Gm23252-201ENSMUST00000103776 110 ntBASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms