Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim6Q8BGE7 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim6Q8BGE7 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim6Q8BGE7 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim6Q8BGE7 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim6Q8BGE7 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC12.24□□□□□ -0.45
Trim6Q8BGE7 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trim6Q8BGE7 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim6Q8BGE7 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim6Q8BGE7 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim6Q8BGE7 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trim6Q8BGE7 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trim6Q8BGE7 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Trim6Q8BGE7 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim6Q8BGE7 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim6Q8BGE7 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC12.24□□□□□ -0.45
Trim6Q8BGE7 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim6Q8BGE7 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim6Q8BGE7 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim6Q8BGE7 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.24□□□□□ -0.45
Trim6Q8BGE7 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim6Q8BGE7 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.24□□□□□ -0.45
Trim6Q8BGE7 Gm10608-202ENSMUST00000213924 676 ntBASIC12.24□□□□□ -0.45
Trim6Q8BGE7 Gm19309-201ENSMUST00000218295 205 ntBASIC12.24□□□□□ -0.45
Trim6Q8BGE7 Gm9035-201ENSMUST00000218318 1697 ntBASIC12.24□□□□□ -0.45
Trim6Q8BGE7 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Trim6Q8BGE7 Gm8712-201ENSMUST00000221090 701 ntBASIC12.24□□□□□ -0.45
Trim6Q8BGE7 CT010486.3-201ENSMUST00000224555 811 ntBASIC12.24□□□□□ -0.45
Trim6Q8BGE7 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim6Q8BGE7 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.24□□□□□ -0.45
Trim6Q8BGE7 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim6Q8BGE7 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Trim6Q8BGE7 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim6Q8BGE7 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim6Q8BGE7 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim6Q8BGE7 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trim6Q8BGE7 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim6Q8BGE7 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trim6Q8BGE7 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Gm12015-201ENSMUST00000117065 843 ntBASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Gm13297-201ENSMUST00000120205 934 ntBASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Gm15547-201ENSMUST00000122152 333 ntBASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Gm29396-201ENSMUST00000185659 716 ntBASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Gm43275-201ENSMUST00000202053 1020 ntBASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Gm8956-201ENSMUST00000203939 825 ntBASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.23□□□□□ -0.45
Trim6Q8BGE7 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Gm18515-201ENSMUST00000219755 797 ntBASIC12.23□□□□□ -0.45
Trim6Q8BGE7 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Erich3-203ENSMUST00000189969 3460 ntBASIC12.23□□□□□ -0.45
Trim6Q8BGE7 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim6Q8BGE7 AC125409.1-201ENSMUST00000223213 3370 ntBASIC12.22□□□□□ -0.45
Trim6Q8BGE7 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim6Q8BGE7 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC12.22□□□□□ -0.45
Trim6Q8BGE7 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim6Q8BGE7 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.22□□□□□ -0.45
Trim6Q8BGE7 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim6Q8BGE7 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim6Q8BGE7 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trim6Q8BGE7 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim6Q8BGE7 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.22□□□□□ -0.45
Trim6Q8BGE7 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim6Q8BGE7 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim6Q8BGE7 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim6Q8BGE7 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms