Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Spg11Q3UHA3 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Plac9b-201ENSMUST00000100809 388 ntTSL 2 BASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Gm5510-201ENSMUST00000117826 486 ntBASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Ccpg1os-201ENSMUST00000124565 711 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Gm13898-201ENSMUST00000141865 610 ntBASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Gm16560-201ENSMUST00000159115 404 ntBASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Mir6396-201ENSMUST00000183603 111 ntBASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Gm44236-201ENSMUST00000204492 513 ntBASIC10.57□□□□□ -0.72
Spg11Q3UHA3 AC123061.1-201ENSMUST00000228021 999 ntBASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Spg11Q3UHA3 AC151836.1-201ENSMUST00000228730 1637 ntBASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Slc25a14-208ENSMUST00000177710 1516 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Coa4-202ENSMUST00000120454 742 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Gm6939-201ENSMUST00000122029 864 ntBASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Atad3aos-204ENSMUST00000174185 482 ntTSL 3 BASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Gm4753-201ENSMUST00000188327 1255 ntBASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Gm37597-201ENSMUST00000191853 382 ntBASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Gm42499-201ENSMUST00000196193 1412 ntBASIC10.56□□□□□ -0.72
Spg11Q3UHA3 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Gpx6-201ENSMUST00000004453 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Sgca-201ENSMUST00000100551 1465 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Gm8302-201ENSMUST00000119217 852 ntBASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Gm15221-201ENSMUST00000144439 414 ntTSL 3 BASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Ighv1-8-201ENSMUST00000192236 293 ntBASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Gm2328-201ENSMUST00000193525 535 ntBASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.56□□□□□ -0.72
Spg11Q3UHA3 AC134607.1-201ENSMUST00000214707 485 ntBASIC10.56□□□□□ -0.72
Spg11Q3UHA3 AC161374.2-201ENSMUST00000223662 596 ntBASIC10.56□□□□□ -0.72
Spg11Q3UHA3 AC133517.1-201ENSMUST00000225825 594 ntBASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Gm44740-201ENSMUST00000205603 1614 ntBASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Spg11Q3UHA3 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Spg11Q3UHA3 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Gm15793-201ENSMUST00000121857 495 ntBASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Gm20616-201ENSMUST00000177262 716 ntTSL 3 BASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Gm43450-201ENSMUST00000202611 632 ntTSL 3 BASIC10.55□□□□□ -0.72
Spg11Q3UHA3 Gm44640-201ENSMUST00000206894 247 ntBASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms