Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 AC238940.3-201ENSMUST00000178830 1246 ntBASIC11.5□□□□□ -0.57
Atxn1P54254 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Atxn1P54254 Gm8342-201ENSMUST00000209839 757 ntBASIC11.5□□□□□ -0.57
Atxn1P54254 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Atxn1P54254 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Atxn1P54254 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.5□□□□□ -0.57
Atxn1P54254 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.5□□□□□ -0.57
Atxn1P54254 AC154532.1-201ENSMUST00000227860 965 ntBASIC11.5□□□□□ -0.57
Atxn1P54254 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atxn1P54254 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atxn1P54254 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Atxn1P54254 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atxn1P54254 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atxn1P54254 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atxn1P54254 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Atxn1P54254 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atxn1P54254 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atxn1P54254 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atxn1P54254 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atxn1P54254 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atxn1P54254 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atxn1P54254 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atxn1P54254 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Atxn1P54254 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Atxn1P54254 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Atxn1P54254 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atxn1P54254 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atxn1P54254 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atxn1P54254 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Atxn1P54254 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Atxn1P54254 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Atxn1P54254 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Atxn1P54254 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Atxn1P54254 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Atxn1P54254 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Atxn1P54254 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Atxn1P54254 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Atxn1P54254 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Atxn1P54254 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Atxn1P54254 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Atxn1P54254 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Atxn1P54254 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Atxn1P54254 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Atxn1P54254 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Atxn1P54254 Cog3-203ENSMUST00000227473 4197 ntBASIC11.49□□□□□ -0.57
Atxn1P54254 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Atxn1P54254 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Atxn1P54254 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Atxn1P54254 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Atxn1P54254 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Atxn1P54254 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Atxn1P54254 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Atxn1P54254 Gm11660-201ENSMUST00000120955 412 ntBASIC11.49□□□□□ -0.57
Atxn1P54254 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Atxn1P54254 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC11.49□□□□□ -0.57
Atxn1P54254 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Atxn1P54254 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Atxn1P54254 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Atxn1P54254 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Atxn1P54254 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Atxn1P54254 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.49□□□□□ -0.57
Atxn1P54254 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Atxn1P54254 Gm43854-201ENSMUST00000200418 394 ntBASIC11.49□□□□□ -0.57
Atxn1P54254 Gm43912-201ENSMUST00000204352 538 ntBASIC11.49□□□□□ -0.57
Atxn1P54254 AC130477.1-201ENSMUST00000226982 420 ntBASIC11.49□□□□□ -0.57
Atxn1P54254 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC11.49□□□□□ -0.57
Atxn1P54254 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Atxn1P54254 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Atxn1P54254 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Atxn1P54254 Gm6655-201ENSMUST00000201932 1309 ntBASIC11.49□□□□□ -0.57
Atxn1P54254 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.49□□□□□ -0.57
Atxn1P54254 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Atxn1P54254 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Atxn1P54254 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Atxn1P54254 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Atxn1P54254 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.49□□□□□ -0.57
Atxn1P54254 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Atxn1P54254 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Atxn1P54254 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Atxn1P54254 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Atxn1P54254 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Atxn1P54254 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Atxn1P54254 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Atxn1P54254 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Atxn1P54254 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Atxn1P54254 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Atxn1P54254 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Atxn1P54254 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Atxn1P54254 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Atxn1P54254 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Atxn1P54254 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.48□□□□□ -0.57
Atxn1P54254 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Atxn1P54254 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Atxn1P54254 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Atxn1P54254 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.48□□□□□ -0.57
Atxn1P54254 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Atxn1P54254 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Atxn1P54254 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Atxn1P54254 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Atxn1P54254 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms