Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.85□□□□□ -0.67
Sox6P40645 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox6P40645 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sox6P40645 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox6P40645 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox6P40645 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox6P40645 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Sox6P40645 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox6P40645 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox6P40645 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Sox6P40645 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox6P40645 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.85□□□□□ -0.67
Sox6P40645 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox6P40645 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox6P40645 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sox6P40645 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Sox6P40645 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.84□□□□□ -0.67
Sox6P40645 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox6P40645 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox6P40645 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC10.84□□□□□ -0.67
Sox6P40645 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox6P40645 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox6P40645 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox6P40645 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox6P40645 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox6P40645 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Sox6P40645 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox6P40645 Gm14130-201ENSMUST00000118417 987 ntBASIC10.84□□□□□ -0.67
Sox6P40645 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC10.84□□□□□ -0.67
Sox6P40645 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Sox6P40645 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox6P40645 Gm25700-201ENSMUST00000177693 110 ntBASIC10.84□□□□□ -0.67
Sox6P40645 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sox6P40645 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.84□□□□□ -0.67
Sox6P40645 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox6P40645 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox6P40645 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Sox6P40645 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Sox6P40645 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox6P40645 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox6P40645 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox6P40645 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox6P40645 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox6P40645 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox6P40645 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox6P40645 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox6P40645 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox6P40645 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Sox6P40645 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox6P40645 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox6P40645 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox6P40645 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.67
Sox6P40645 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Sox6P40645 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox6P40645 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Sox6P40645 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox6P40645 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox6P40645 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Sox6P40645 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.83□□□□□ -0.68
Sox6P40645 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox6P40645 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox6P40645 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox6P40645 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Sox6P40645 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox6P40645 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox6P40645 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Sox6P40645 Gm12749-201ENSMUST00000122138 1159 ntBASIC10.83□□□□□ -0.68
Sox6P40645 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox6P40645 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.83□□□□□ -0.68
Sox6P40645 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox6P40645 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.83□□□□□ -0.68
Sox6P40645 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox6P40645 Gm9678-201ENSMUST00000198979 1149 ntBASIC10.83□□□□□ -0.68
Sox6P40645 Gm5869-201ENSMUST00000200248 1257 ntBASIC10.83□□□□□ -0.68
Sox6P40645 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.83□□□□□ -0.68
Sox6P40645 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.83□□□□□ -0.68
Sox6P40645 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox6P40645 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox6P40645 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.83□□□□□ -0.68
Sox6P40645 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Sox6P40645 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox6P40645 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox6P40645 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox6P40645 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox6P40645 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox6P40645 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox6P40645 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC10.83□□□□□ -0.68
Sox6P40645 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox6P40645 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.83□□□□□ -0.68
Sox6P40645 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox6P40645 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox6P40645 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox6P40645 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox6P40645 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Sox6P40645 Gm44415-201ENSMUST00000204151 2112 ntBASIC10.82□□□□□ -0.68
Sox6P40645 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox6P40645 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox6P40645 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.82□□□□□ -0.68
Sox6P40645 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox6P40645 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms