Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.26□□□□□ -0.13
TNFP01375 HINT2P1-201ENST00000419438 481 ntBASIC14.26□□□□□ -0.13
TNFP01375 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC14.26□□□□□ -0.13
TNFP01375 OR2R1P-201ENST00000441404 914 ntBASIC14.26□□□□□ -0.13
TNFP01375 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.26□□□□□ -0.13
TNFP01375 FTLP1-201ENST00000449155 526 ntBASIC14.26□□□□□ -0.13
TNFP01375 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.26□□□□□ -0.13
TNFP01375 AC026803.1-201ENST00000569130 274 ntBASIC14.26□□□□□ -0.13
TNFP01375 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.26□□□□□ -0.13
TNFP01375 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.26□□□□□ -0.13
TNFP01375 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.26□□□□□ -0.13
TNFP01375 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC14.26□□□□□ -0.13
TNFP01375 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TNFP01375 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TNFP01375 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TNFP01375 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TNFP01375 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TNFP01375 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TNFP01375 LINC01165-201ENST00000445190 1623 ntBASIC14.26□□□□□ -0.13
TNFP01375 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TNFP01375 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TNFP01375 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TNFP01375 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TNFP01375 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.25□□□□□ -0.13
TNFP01375 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFP01375 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFP01375 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.25□□□□□ -0.13
TNFP01375 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.25□□□□□ -0.13
TNFP01375 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFP01375 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
TNFP01375 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TNFP01375 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFP01375 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.25□□□□□ -0.13
TNFP01375 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFP01375 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFP01375 FAM90A2P-201ENST00000511144 1395 ntBASIC14.25□□□□□ -0.13
TNFP01375 FAM90A25P-201ENST00000528404 1395 ntBASIC14.25□□□□□ -0.13
TNFP01375 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFP01375 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TNFP01375 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TNFP01375 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFP01375 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFP01375 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
TNFP01375 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.25□□□□□ -0.13
TNFP01375 GGCT-203ENST00000409144 836 ntTSL 2 BASIC14.25□□□□□ -0.13
TNFP01375 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.25□□□□□ -0.13
TNFP01375 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.25□□□□□ -0.13
TNFP01375 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC14.25□□□□□ -0.13
TNFP01375 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC14.25□□□□□ -0.13
TNFP01375 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TNFP01375 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TNFP01375 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.25□□□□□ -0.13
TNFP01375 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC14.25□□□□□ -0.13
TNFP01375 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
TNFP01375 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.25□□□□□ -0.13
TNFP01375 AL109837.1-201ENST00000603272 613 ntBASIC14.25□□□□□ -0.13
TNFP01375 AL591471.1-201ENST00000621855 229 ntBASIC14.25□□□□□ -0.13
TNFP01375 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC14.25□□□□□ -0.13
TNFP01375 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFP01375 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFP01375 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TNFP01375 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.25□□□□□ -0.13
TNFP01375 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFP01375 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFP01375 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFP01375 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFP01375 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TNFP01375 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFP01375 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TNFP01375 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFP01375 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFP01375 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFP01375 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TNFP01375 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TNFP01375 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFP01375 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFP01375 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TNFP01375 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFP01375 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.25□□□□□ -0.13
TNFP01375 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.25□□□□□ -0.13
TNFP01375 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.25□□□□□ -0.13
TNFP01375 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFP01375 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TNFP01375 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TNFP01375 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.25□□□□□ -0.13
TNFP01375 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFP01375 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TNFP01375 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TNFP01375 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TNFP01375 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFP01375 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.24□□□□□ -0.13
TNFP01375 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TNFP01375 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TNFP01375 AC015909.3-201ENST00000572855 1794 ntBASIC14.24□□□□□ -0.13
TNFP01375 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.24□□□□□ -0.13
TNFP01375 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.24□□□□□ -0.13
TNFP01375 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFP01375 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFP01375 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TNFP01375 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms