Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Tmprss3-202ENSMUST00000114549 2872 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Npc1l1-201ENSMUST00000004505 4467 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Cdc42bpa-203ENSMUST00000097453 6704 ntTSL 5 BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Vmn1r213-204ENSMUST00000228758 5975 ntAPPRIS P2 BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trav8-1A0A075B641 Alms1-201ENSMUST00000072018 9986 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trav8-1A0A075B641 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trav8-1A0A075B641 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC8.21□□□□□ -1.09
Trav8-1A0A075B641 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trav8-1A0A075B641 Dqx1-201ENSMUST00000077502 3257 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Trav8-1A0A075B641 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trav8-1A0A075B641 Ank1-215ENSMUST00000173248 7100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trav8-1A0A075B641 Gm29245-201ENSMUST00000187332 1416 ntBASIC8.21□□□□□ -1.09
Trav8-1A0A075B641 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trav8-1A0A075B641 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trav8-1A0A075B641 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC8.21□□□□□ -1.09
Trav8-1A0A075B641 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trav8-1A0A075B641 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trav8-1A0A075B641 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trav8-1A0A075B641 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Trav8-1A0A075B641 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trav8-1A0A075B641 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trav8-1A0A075B641 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trav8-1A0A075B641 Kmt2a-201ENSMUST00000002095 16461 ntAPPRIS P2 TSL 5 BASIC8.21□□□□□ -1.09
Trav8-1A0A075B641 Mlh3-202ENSMUST00000166821 5420 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trav8-1A0A075B641 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trav8-1A0A075B641 5730455P16Rik-204ENSMUST00000179332 4536 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Rasal1-205ENSMUST00000156722 3251 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Gm11298-201ENSMUST00000120503 1799 ntBASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Gm43692-201ENSMUST00000198236 1062 ntBASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Gm44958-201ENSMUST00000203734 736 ntBASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Gm8463-201ENSMUST00000208573 613 ntBASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Anln-201ENSMUST00000040912 4605 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 R3hdm2-218ENSMUST00000170336 3639 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Urb1-203ENSMUST00000140920 7344 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Helz-201ENSMUST00000075012 6218 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Gm43636-201ENSMUST00000201501 2235 ntBASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trav8-1A0A075B641 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trav8-1A0A075B641 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trav8-1A0A075B641 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Trav8-1A0A075B641 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trav8-1A0A075B641 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trav8-1A0A075B641 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trav8-1A0A075B641 Ralgapb-202ENSMUST00000109485 6709 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trav8-1A0A075B641 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trav8-1A0A075B641 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trav8-1A0A075B641 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trav8-1A0A075B641 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trav8-1A0A075B641 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trav8-1A0A075B641 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trav8-1A0A075B641 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trav8-1A0A075B641 Cspg4-201ENSMUST00000035661 8121 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trav8-1A0A075B641 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trav8-1A0A075B641 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Trav8-1A0A075B641 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms