Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm26047-201ENSMUST00000157308 113 ntBASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Gm26047-202ENSMUST00000198840 115 ntBASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.4□□□□□ -0.74
H2afb3S4R1G7 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
H2afb3S4R1G7 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.75
H2afb3S4R1G7 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.75
H2afb3S4R1G7 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
H2afb3S4R1G7 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
H2afb3S4R1G7 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
H2afb3S4R1G7 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.4□□□□□ -0.75
H2afb3S4R1G7 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
H2afb3S4R1G7 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
H2afb3S4R1G7 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
H2afb3S4R1G7 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
H2afb3S4R1G7 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Gm15276-201ENSMUST00000145953 498 ntBASIC10.39□□□□□ -0.75
H2afb3S4R1G7 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Gm18065-201ENSMUST00000221395 526 ntBASIC10.39□□□□□ -0.75
H2afb3S4R1G7 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Gm807-202ENSMUST00000224929 408 ntBASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Cts7-204ENSMUST00000225321 1257 ntBASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Gm17383-201ENSMUST00000078739 1041 ntBASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Gm18222-201ENSMUST00000202416 1387 ntBASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
H2afb3S4R1G7 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
H2afb3S4R1G7 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms