Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Gm11949-201ENSMUST00000117640 372 ntBASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Gm15615-201ENSMUST00000118876 198 ntBASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Upk3aQ9JKX8 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Gm16166-201ENSMUST00000118291 787 ntBASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Gm15617-201ENSMUST00000118973 771 ntBASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Gm9211-201ENSMUST00000182882 975 ntBASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Upk3aQ9JKX8 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Upk3aQ9JKX8 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms