Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccdc28bQ8CEG5 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Rims2-204ENSMUST00000226410 3685 ntBASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccdc28bQ8CEG5 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28bQ8CEG5 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.4□□□□□ -0.58
Ccdc28bQ8CEG5 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28bQ8CEG5 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28bQ8CEG5 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28bQ8CEG5 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Ccdc28bQ8CEG5 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28bQ8CEG5 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28bQ8CEG5 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28bQ8CEG5 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28bQ8CEG5 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC11.4□□□□□ -0.58
Ccdc28bQ8CEG5 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28bQ8CEG5 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28bQ8CEG5 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.4□□□□□ -0.58
Ccdc28bQ8CEG5 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.4□□□□□ -0.58
Ccdc28bQ8CEG5 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Ccdc28bQ8CEG5 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.4□□□□□ -0.58
Ccdc28bQ8CEG5 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.4□□□□□ -0.58
Ccdc28bQ8CEG5 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.4□□□□□ -0.58
Ccdc28bQ8CEG5 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.4□□□□□ -0.58
Ccdc28bQ8CEG5 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.4□□□□□ -0.58
Ccdc28bQ8CEG5 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28bQ8CEG5 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.4□□□□□ -0.58
Ccdc28bQ8CEG5 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28bQ8CEG5 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28bQ8CEG5 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.4□□□□□ -0.58
Ccdc28bQ8CEG5 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC11.4□□□□□ -0.58
Ccdc28bQ8CEG5 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28bQ8CEG5 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28bQ8CEG5 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28bQ8CEG5 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28bQ8CEG5 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28bQ8CEG5 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28bQ8CEG5 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28bQ8CEG5 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28bQ8CEG5 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccdc28bQ8CEG5 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ccdc28bQ8CEG5 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ccdc28bQ8CEG5 Gm21039-201ENSMUST00000223359 2012 ntBASIC11.4□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms