Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Smarcc2-201ENSMUST00000026433 4533 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Gm5766-201ENSMUST00000160520 1977 ntBASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Gm37131-201ENSMUST00000192502 1561 ntBASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Gm7967-202ENSMUST00000191042 5042 ntBASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Wdfy3-201ENSMUST00000053177 14274 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Plxdc2-201ENSMUST00000028081 6947 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Smco3Q8BQM7 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Fam210a-201ENSMUST00000042852 9651 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Limch1-202ENSMUST00000101164 5192 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Itgad-202ENSMUST00000106237 4105 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Gm43242-201ENSMUST00000199507 1776 ntBASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Smarcc2-202ENSMUST00000099131 4562 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Ncbp3-201ENSMUST00000021135 12106 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Gm4984-201ENSMUST00000115987 360 ntBASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Gm14928-201ENSMUST00000120198 477 ntBASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Gm13570-201ENSMUST00000140763 309 ntBASIC9.48□□□□□ -0.89
Smco3Q8BQM7 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Gm42442-201ENSMUST00000197951 1133 ntBASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Gm44755-201ENSMUST00000207830 2102 ntBASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Gm6560-201ENSMUST00000198588 1591 ntBASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Smarca1-202ENSMUST00000088973 4798 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Flna-203ENSMUST00000114299 8456 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Asxl2-207ENSMUST00000153102 4462 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Gm6092-201ENSMUST00000121659 2029 ntBASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Smco3Q8BQM7 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Fyco1-201ENSMUST00000084715 7949 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 478 ms