Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Gm32999-201ENSMUST00000192693 562 ntBASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Rprl1-202ENSMUST00000198476 238 ntBASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Gm21769-201ENSMUST00000211922 111 ntBASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Cts7-204ENSMUST00000225321 1257 ntBASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Chmp2bQ8BJF9 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Gm26286-201ENSMUST00000104166 134 ntBASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Gm7399-201ENSMUST00000032395 858 ntBASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Chmp2bQ8BJF9 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 Gm11660-201ENSMUST00000120955 412 ntBASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.8□□□□□ -0.52
Chmp2bQ8BJF9 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms