Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col12a1Q60847 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col12a1Q60847 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col12a1Q60847 Gm38348-201ENSMUST00000191718 2273 ntBASIC11.08□□□□□ -0.64
Col12a1Q60847 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col12a1Q60847 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.08□□□□□ -0.64
Col12a1Q60847 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Col12a1Q60847 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Col12a1Q60847 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Col12a1Q60847 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Col12a1Q60847 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Col12a1Q60847 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col12a1Q60847 Gm14715-201ENSMUST00000156823 643 ntTSL 3 BASIC11.08□□□□□ -0.64
Col12a1Q60847 Gm17782-201ENSMUST00000174345 880 ntBASIC11.08□□□□□ -0.64
Col12a1Q60847 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col12a1Q60847 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Col12a1Q60847 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Col12a1Q60847 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col12a1Q60847 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Col12a1Q60847 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col12a1Q60847 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Col12a1Q60847 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col12a1Q60847 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.08□□□□□ -0.64
Col12a1Q60847 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Col12a1Q60847 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col12a1Q60847 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col12a1Q60847 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col12a1Q60847 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col12a1Q60847 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col12a1Q60847 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col12a1Q60847 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC11.07□□□□□ -0.64
Col12a1Q60847 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Col12a1Q60847 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col12a1Q60847 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Col12a1Q60847 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Col12a1Q60847 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.07□□□□□ -0.64
Col12a1Q60847 Gm5944-201ENSMUST00000118182 1001 ntBASIC11.07□□□□□ -0.64
Col12a1Q60847 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC11.07□□□□□ -0.64
Col12a1Q60847 Rpl17-ps11-201ENSMUST00000161946 729 ntBASIC11.07□□□□□ -0.64
Col12a1Q60847 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC11.07□□□□□ -0.64
Col12a1Q60847 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.07□□□□□ -0.64
Col12a1Q60847 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col12a1Q60847 AC132881.1-201ENSMUST00000223780 1062 ntBASIC11.07□□□□□ -0.64
Col12a1Q60847 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col12a1Q60847 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col12a1Q60847 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col12a1Q60847 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Col12a1Q60847 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col12a1Q60847 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Col12a1Q60847 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Col12a1Q60847 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col12a1Q60847 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col12a1Q60847 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col12a1Q60847 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.07□□□□□ -0.64
Col12a1Q60847 AC116596.1-201ENSMUST00000228112 1762 ntBASIC11.07□□□□□ -0.64
Col12a1Q60847 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col12a1Q60847 Scgb1b29-201ENSMUST00000108094 282 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col12a1Q60847 Gm15132-201ENSMUST00000118581 652 ntBASIC11.07□□□□□ -0.64
Col12a1Q60847 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC11.07□□□□□ -0.64
Col12a1Q60847 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC11.07□□□□□ -0.64
Col12a1Q60847 Gm15258-201ENSMUST00000153801 741 ntBASIC11.07□□□□□ -0.64
Col12a1Q60847 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col12a1Q60847 Gm28499-201ENSMUST00000191576 666 ntTSL 2 BASIC11.07□□□□□ -0.64
Col12a1Q60847 Gm38314-201ENSMUST00000195709 625 ntBASIC11.07□□□□□ -0.64
Col12a1Q60847 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.07□□□□□ -0.64
Col12a1Q60847 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC11.07□□□□□ -0.64
Col12a1Q60847 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col12a1Q60847 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Col12a1Q60847 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Col12a1Q60847 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col12a1Q60847 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Col12a1Q60847 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col12a1Q60847 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Col12a1Q60847 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.07□□□□□ -0.64
Col12a1Q60847 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Col12a1Q60847 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Col12a1Q60847 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Col12a1Q60847 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col12a1Q60847 4933405D12Rik-201ENSMUST00000180557 1383 ntTSL 2 BASIC11.07□□□□□ -0.64
Col12a1Q60847 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Col12a1Q60847 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col12a1Q60847 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col12a1Q60847 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Col12a1Q60847 Dpm1-202ENSMUST00000109193 1076 ntTSL 5 BASIC11.07□□□□□ -0.64
Col12a1Q60847 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Col12a1Q60847 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC11.07□□□□□ -0.64
Col12a1Q60847 Gm13372-201ENSMUST00000123129 688 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Col12a1Q60847 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC11.07□□□□□ -0.64
Col12a1Q60847 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.07□□□□□ -0.64
Col12a1Q60847 1700069L16Rik-201ENSMUST00000047891 537 ntAPPRIS P5 TSL 2 BASIC11.07□□□□□ -0.64
Col12a1Q60847 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC11.07□□□□□ -0.64
Col12a1Q60847 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Col12a1Q60847 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.06□□□□□ -0.64
Col12a1Q60847 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col12a1Q60847 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col12a1Q60847 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC11.06□□□□□ -0.64
Col12a1Q60847 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Col12a1Q60847 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Col12a1Q60847 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col12a1Q60847 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms