Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
ClpbQ60649 Gm8420-201ENSMUST00000097103 598 ntBASIC11.1□□□□□ -0.63
ClpbQ60649 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
ClpbQ60649 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.1□□□□□ -0.63
ClpbQ60649 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
ClpbQ60649 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClpbQ60649 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
ClpbQ60649 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClpbQ60649 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.1□□□□□ -0.63
ClpbQ60649 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClpbQ60649 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClpbQ60649 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
ClpbQ60649 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClpbQ60649 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClpbQ60649 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClpbQ60649 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClpbQ60649 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
ClpbQ60649 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
ClpbQ60649 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClpbQ60649 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
ClpbQ60649 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
ClpbQ60649 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ClpbQ60649 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
ClpbQ60649 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClpbQ60649 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClpbQ60649 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
ClpbQ60649 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ClpbQ60649 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClpbQ60649 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClpbQ60649 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
ClpbQ60649 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
ClpbQ60649 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClpbQ60649 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClpbQ60649 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClpbQ60649 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClpbQ60649 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.09□□□□□ -0.63
ClpbQ60649 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ClpbQ60649 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClpbQ60649 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClpbQ60649 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.09□□□□□ -0.63
ClpbQ60649 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ClpbQ60649 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.09□□□□□ -0.63
ClpbQ60649 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
ClpbQ60649 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
ClpbQ60649 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClpbQ60649 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClpbQ60649 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.09□□□□□ -0.63
ClpbQ60649 Gm13611-201ENSMUST00000118269 318 ntBASIC11.09□□□□□ -0.63
ClpbQ60649 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.09□□□□□ -0.63
ClpbQ60649 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.09□□□□□ -0.63
ClpbQ60649 Gm11960-201ENSMUST00000122068 925 ntBASIC11.09□□□□□ -0.63
ClpbQ60649 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ClpbQ60649 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClpbQ60649 Gm20426-201ENSMUST00000173657 440 ntBASIC11.09□□□□□ -0.63
ClpbQ60649 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClpbQ60649 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.09□□□□□ -0.63
ClpbQ60649 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ClpbQ60649 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.09□□□□□ -0.63
ClpbQ60649 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.09□□□□□ -0.63
ClpbQ60649 Ntng1-201ENSMUST00000051253 327 ntBASIC11.09□□□□□ -0.63
ClpbQ60649 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ClpbQ60649 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
ClpbQ60649 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClpbQ60649 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClpbQ60649 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
ClpbQ60649 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
ClpbQ60649 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
ClpbQ60649 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.09□□□□□ -0.63
ClpbQ60649 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClpbQ60649 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClpbQ60649 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClpbQ60649 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClpbQ60649 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClpbQ60649 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
ClpbQ60649 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.08□□□□□ -0.63
ClpbQ60649 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
ClpbQ60649 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
ClpbQ60649 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ClpbQ60649 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
ClpbQ60649 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ClpbQ60649 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
ClpbQ60649 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ClpbQ60649 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
ClpbQ60649 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
ClpbQ60649 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ClpbQ60649 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ClpbQ60649 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
ClpbQ60649 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ClpbQ60649 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ClpbQ60649 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ClpbQ60649 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
ClpbQ60649 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
ClpbQ60649 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ClpbQ60649 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ClpbQ60649 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.08□□□□□ -0.64
ClpbQ60649 Gm23251-201ENSMUST00000103773 110 ntBASIC11.08□□□□□ -0.64
ClpbQ60649 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
ClpbQ60649 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.08□□□□□ -0.64
ClpbQ60649 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.08□□□□□ -0.64
ClpbQ60649 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms