Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Gm15808-201ENSMUST00000119046 604 ntBASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Gm11783-201ENSMUST00000119549 885 ntBASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Gm25881-201ENSMUST00000157783 103 ntBASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Gm45186-201ENSMUST00000206874 478 ntBASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Gm45575-201ENSMUST00000210283 548 ntBASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav5d-4Q5R1F6 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav5d-4Q5R1F6 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav5d-4Q5R1F6 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Trav5d-4Q5R1F6 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav5d-4Q5R1F6 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav5d-4Q5R1F6 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav5d-4Q5R1F6 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC9.9□□□□□ -0.83
Trav5d-4Q5R1F6 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav5d-4Q5R1F6 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav5d-4Q5R1F6 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav5d-4Q5R1F6 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Gm9279-201ENSMUST00000223175 1606 ntBASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Gm7964-201ENSMUST00000051522 1378 ntBASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Gm18806-201ENSMUST00000207607 1775 ntBASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Gm38055-201ENSMUST00000195353 2217 ntBASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Gm11500-201ENSMUST00000118237 601 ntBASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Gm12196-201ENSMUST00000120954 262 ntBASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Gm45113-201ENSMUST00000207518 165 ntBASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Gm18212-201ENSMUST00000211678 889 ntBASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Gm43931-201ENSMUST00000204817 2870 ntBASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC9.89□□□□□ -0.83
Trav5d-4Q5R1F6 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms