Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm13842-202ENSMUST00000156331 865 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HttP42859 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HttP42859 Rbp2-204ENSMUST00000189446 803 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
HttP42859 Gm43450-201ENSMUST00000202611 632 ntTSL 3 BASIC11.87□□□□□ -0.51
HttP42859 AC155300.1-201ENSMUST00000219134 480 ntBASIC11.87□□□□□ -0.51
HttP42859 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HttP42859 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.87□□□□□ -0.51
HttP42859 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HttP42859 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HttP42859 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HttP42859 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HttP42859 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HttP42859 Igsf5-201ENSMUST00000000163 1851 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HttP42859 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HttP42859 Gm15727-201ENSMUST00000122416 437 ntBASIC11.87□□□□□ -0.51
HttP42859 n-R5s154-201ENSMUST00000122513 108 ntBASIC11.87□□□□□ -0.51
HttP42859 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC11.87□□□□□ -0.51
HttP42859 Gm44388-201ENSMUST00000204350 258 ntBASIC11.87□□□□□ -0.51
HttP42859 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HttP42859 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HttP42859 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
HttP42859 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HttP42859 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
HttP42859 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HttP42859 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HttP42859 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HttP42859 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HttP42859 Rps25-205ENSMUST00000216867 577 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HttP42859 AC155293.1-201ENSMUST00000219793 1026 ntBASIC11.86□□□□□ -0.51
HttP42859 Gm5148-202ENSMUST00000099128 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HttP42859 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC11.86□□□□□ -0.51
HttP42859 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HttP42859 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HttP42859 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HttP42859 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HttP42859 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
HttP42859 Stmn3-201ENSMUST00000103045 1136 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HttP42859 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
HttP42859 Gm14231-201ENSMUST00000120090 592 ntBASIC11.86□□□□□ -0.51
HttP42859 Gm14538-201ENSMUST00000122019 1327 ntBASIC11.86□□□□□ -0.51
HttP42859 Actb-207ENSMUST00000167721 1242 ntTSL 5 BASIC11.86□□□□□ -0.51
HttP42859 Gm5472-201ENSMUST00000178604 1678 ntBASIC11.86□□□□□ -0.51
HttP42859 Ccl6-201ENSMUST00000019071 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HttP42859 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.86□□□□□ -0.51
HttP42859 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HttP42859 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HttP42859 AC161374.2-201ENSMUST00000223662 596 ntBASIC11.86□□□□□ -0.51
HttP42859 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HttP42859 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
HttP42859 Gm8174-201ENSMUST00000064353 1001 ntBASIC11.86□□□□□ -0.51
HttP42859 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
HttP42859 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
HttP42859 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
HttP42859 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
HttP42859 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HttP42859 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
HttP42859 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HttP42859 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HttP42859 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HttP42859 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
HttP42859 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HttP42859 Gm13547-202ENSMUST00000113810 629 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HttP42859 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
HttP42859 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC11.86□□□□□ -0.51
HttP42859 Gm17107-201ENSMUST00000170983 553 ntBASIC11.86□□□□□ -0.51
HttP42859 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
HttP42859 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
HttP42859 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
HttP42859 Gm17797-201ENSMUST00000182175 997 ntBASIC11.86□□□□□ -0.51
HttP42859 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC11.86□□□□□ -0.51
HttP42859 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC11.86□□□□□ -0.51
HttP42859 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC11.86□□□□□ -0.51
HttP42859 Gm18030-201ENSMUST00000222163 731 ntBASIC11.86□□□□□ -0.51
HttP42859 AC165092.1-201ENSMUST00000224018 486 ntBASIC11.86□□□□□ -0.51
HttP42859 AC122459.4-201ENSMUST00000228654 551 ntBASIC11.86□□□□□ -0.51
HttP42859 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HttP42859 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HttP42859 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
HttP42859 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
HttP42859 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
HttP42859 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HttP42859 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HttP42859 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HttP42859 Gm13071-201ENSMUST00000122237 376 ntBASIC11.85□□□□□ -0.51
HttP42859 Gm11789-205ENSMUST00000148579 649 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HttP42859 Tead1-211ENSMUST00000170352 1218 ntTSL 5 BASIC11.85□□□□□ -0.51
HttP42859 Gm5259-201ENSMUST00000191231 800 ntBASIC11.85□□□□□ -0.51
HttP42859 Gm3791-201ENSMUST00000220790 768 ntBASIC11.85□□□□□ -0.51
HttP42859 AC134793.1-202ENSMUST00000227444 803 ntBASIC11.85□□□□□ -0.51
HttP42859 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HttP42859 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HttP42859 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
HttP42859 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HttP42859 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HttP42859 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HttP42859 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HttP42859 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.85□□□□□ -0.51
HttP42859 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HttP42859 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
HttP42859 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms