Protein–RNA interactions for Protein: P34928

Apoc1, Apolipoprotein C-I, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoc1P34928 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Apoc1P34928 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.08□□□□□ -0.8
Apoc1P34928 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.08□□□□□ -0.8
Apoc1P34928 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Apoc1P34928 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Apoc1P34928 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
Apoc1P34928 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Apoc1P34928 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC10.08□□□□□ -0.8
Apoc1P34928 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10.08□□□□□ -0.8
Apoc1P34928 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC10.08□□□□□ -0.8
Apoc1P34928 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.08□□□□□ -0.8
Apoc1P34928 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.08□□□□□ -0.8
Apoc1P34928 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC10.08□□□□□ -0.8
Apoc1P34928 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Apoc1P34928 Gm5455-201ENSMUST00000058710 715 ntBASIC10.08□□□□□ -0.8
Apoc1P34928 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Apoc1P34928 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Apoc1P34928 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Apoc1P34928 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Apoc1P34928 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Apoc1P34928 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Apoc1P34928 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Apoc1P34928 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Apoc1P34928 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Apoc1P34928 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC10.08□□□□□ -0.8
Apoc1P34928 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Apoc1P34928 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Apoc1P34928 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Apoc1P34928 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Apoc1P34928 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.08□□□□□ -0.8
Apoc1P34928 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Apoc1P34928 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Apoc1P34928 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Apoc1P34928 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Apoc1P34928 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.07□□□□□ -0.8
Apoc1P34928 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Apoc1P34928 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.07□□□□□ -0.8
Apoc1P34928 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Apoc1P34928 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Apoc1P34928 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Apoc1P34928 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
Apoc1P34928 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Apoc1P34928 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Apoc1P34928 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Apoc1P34928 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Apoc1P34928 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Apoc1P34928 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Apoc1P34928 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Apoc1P34928 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
Apoc1P34928 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.07□□□□□ -0.8
Apoc1P34928 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Apoc1P34928 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
Apoc1P34928 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Apoc1P34928 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Apoc1P34928 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Apoc1P34928 Gm5940-201ENSMUST00000117582 1068 ntBASIC10.07□□□□□ -0.8
Apoc1P34928 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC10.07□□□□□ -0.8
Apoc1P34928 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC10.07□□□□□ -0.8
Apoc1P34928 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Apoc1P34928 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.07□□□□□ -0.8
Apoc1P34928 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Apoc1P34928 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC10.07□□□□□ -0.8
Apoc1P34928 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC10.07□□□□□ -0.8
Apoc1P34928 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.07□□□□□ -0.8
Apoc1P34928 Gm7399-201ENSMUST00000032395 858 ntBASIC10.07□□□□□ -0.8
Apoc1P34928 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Apoc1P34928 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Apoc1P34928 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Apoc1P34928 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Apoc1P34928 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Apoc1P34928 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Apoc1P34928 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Apoc1P34928 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Apoc1P34928 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Apoc1P34928 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Apoc1P34928 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Apoc1P34928 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Apoc1P34928 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Apoc1P34928 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Apoc1P34928 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.07□□□□□ -0.8
Apoc1P34928 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Apoc1P34928 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Apoc1P34928 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Apoc1P34928 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Apoc1P34928 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Apoc1P34928 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Apoc1P34928 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Apoc1P34928 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.06□□□□□ -0.8
Apoc1P34928 AC123857.2-201ENSMUST00000225756 1582 ntBASIC10.06□□□□□ -0.8
Apoc1P34928 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Apoc1P34928 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Apoc1P34928 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Apoc1P34928 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Apoc1P34928 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Apoc1P34928 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Apoc1P34928 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.06□□□□□ -0.8
Apoc1P34928 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Apoc1P34928 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Apoc1P34928 Gm13392-201ENSMUST00000117708 150 ntBASIC10.06□□□□□ -0.8
Apoc1P34928 Gm15004-201ENSMUST00000119192 630 ntBASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms