Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.03■□□□□ 0.16
RFX1P22670 CNN2P8-201ENST00000421872 913 ntBASIC16.03■□□□□ 0.16
RFX1P22670 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
RFX1P22670 AC004898.1-201ENST00000451057 766 ntBASIC16.03■□□□□ 0.16
RFX1P22670 AC091804.1-201ENST00000486888 567 ntBASIC16.03■□□□□ 0.16
RFX1P22670 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC16.03■□□□□ 0.16
RFX1P22670 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RFX1P22670 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.03■□□□□ 0.16
RFX1P22670 AC025279.2-201ENST00000569730 653 ntBASIC16.03■□□□□ 0.16
RFX1P22670 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC16.03■□□□□ 0.16
RFX1P22670 AC016629.1-201ENST00000596579 586 ntBASIC16.03■□□□□ 0.16
RFX1P22670 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.03■□□□□ 0.16
RFX1P22670 AC005695.3-201ENST00000614522 232 ntBASIC16.03■□□□□ 0.16
RFX1P22670 AC138466.3-201ENST00000619983 221 ntBASIC16.03■□□□□ 0.16
RFX1P22670 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.03■□□□□ 0.16
RFX1P22670 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.03■□□□□ 0.16
RFX1P22670 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFX1P22670 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFX1P22670 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFX1P22670 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.03■□□□□ 0.16
RFX1P22670 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RFX1P22670 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.03■□□□□ 0.16
RFX1P22670 AC136759.1-202ENST00000530858 2194 ntBASIC16.03■□□□□ 0.16
RFX1P22670 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
RFX1P22670 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
RFX1P22670 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RFX1P22670 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.03■□□□□ 0.16
RFX1P22670 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.03■□□□□ 0.16
RFX1P22670 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.03■□□□□ 0.16
RFX1P22670 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFX1P22670 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.02■□□□□ 0.16
RFX1P22670 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFX1P22670 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
RFX1P22670 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
RFX1P22670 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.02■□□□□ 0.16
RFX1P22670 AL138709.1-201ENST00000614840 1693 ntBASIC16.02■□□□□ 0.16
RFX1P22670 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFX1P22670 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.02■□□□□ 0.16
RFX1P22670 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RFX1P22670 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC16.02■□□□□ 0.16
RFX1P22670 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.02■□□□□ 0.16
RFX1P22670 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC16.02■□□□□ 0.16
RFX1P22670 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC16.02■□□□□ 0.16
RFX1P22670 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFX1P22670 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RFX1P22670 AC027601.5-201ENST00000624065 2482 ntBASIC16.02■□□□□ 0.16
RFX1P22670 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.02■□□□□ 0.16
RFX1P22670 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.02■□□□□ 0.16
RFX1P22670 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFX1P22670 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFX1P22670 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.02■□□□□ 0.16
RFX1P22670 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RFX1P22670 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.02■□□□□ 0.16
RFX1P22670 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFX1P22670 MIR663B-201ENST00000408361 115 ntBASIC16.02■□□□□ 0.16
RFX1P22670 MIR1202-201ENST00000408529 83 ntBASIC16.02■□□□□ 0.16
RFX1P22670 HOMER2P2-201ENST00000451621 847 ntBASIC16.02■□□□□ 0.16
RFX1P22670 FTLP10-202ENST00000505798 471 ntBASIC16.02■□□□□ 0.16
RFX1P22670 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.02■□□□□ 0.16
RFX1P22670 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.02■□□□□ 0.16
RFX1P22670 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
RFX1P22670 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC16.02■□□□□ 0.16
RFX1P22670 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.02■□□□□ 0.16
RFX1P22670 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.02■□□□□ 0.16
RFX1P22670 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RFX1P22670 AC145423.3-201ENST00000615987 467 ntBASIC16.02■□□□□ 0.16
RFX1P22670 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
RFX1P22670 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC16.02■□□□□ 0.16
RFX1P22670 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RFX1P22670 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RFX1P22670 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.02■□□□□ 0.15
RFX1P22670 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
RFX1P22670 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RFX1P22670 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
RFX1P22670 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RFX1P22670 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFX1P22670 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFX1P22670 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFX1P22670 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RFX1P22670 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFX1P22670 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RFX1P22670 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFX1P22670 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.01■□□□□ 0.15
RFX1P22670 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.01■□□□□ 0.15
RFX1P22670 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
RFX1P22670 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFX1P22670 AC011840.2-201ENST00000563063 1520 ntBASIC16.01■□□□□ 0.15
RFX1P22670 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
RFX1P22670 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.01■□□□□ 0.15
RFX1P22670 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RFX1P22670 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.01■□□□□ 0.15
RFX1P22670 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
RFX1P22670 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.01■□□□□ 0.15
RFX1P22670 AL591846.1-201ENST00000451736 433 ntBASIC16.01■□□□□ 0.15
RFX1P22670 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.01■□□□□ 0.15
RFX1P22670 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFX1P22670 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.01■□□□□ 0.15
RFX1P22670 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFX1P22670 AC078819.1-201ENST00000547454 765 ntBASIC16.01■□□□□ 0.15
RFX1P22670 AC012085.1-201ENST00000548270 765 ntBASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms