Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TnfP06804 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TnfP06804 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.23□□□□□ -0.45
TnfP06804 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.23□□□□□ -0.45
TnfP06804 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TnfP06804 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
TnfP06804 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TnfP06804 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
TnfP06804 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
TnfP06804 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC12.23□□□□□ -0.45
TnfP06804 Gm8111-201ENSMUST00000117659 987 ntBASIC12.23□□□□□ -0.45
TnfP06804 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TnfP06804 Gm13422-201ENSMUST00000118834 504 ntBASIC12.23□□□□□ -0.45
TnfP06804 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TnfP06804 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.23□□□□□ -0.45
TnfP06804 Gm8194-201ENSMUST00000159783 859 ntBASIC12.23□□□□□ -0.45
TnfP06804 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TnfP06804 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TnfP06804 Gm23694-201ENSMUST00000179335 110 ntBASIC12.23□□□□□ -0.45
TnfP06804 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.23□□□□□ -0.45
TnfP06804 Gm28324-201ENSMUST00000187913 264 ntBASIC12.23□□□□□ -0.45
TnfP06804 Gm38210-201ENSMUST00000191944 809 ntBASIC12.23□□□□□ -0.45
TnfP06804 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.23□□□□□ -0.45
TnfP06804 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC12.23□□□□□ -0.45
TnfP06804 Gm45594-201ENSMUST00000211717 241 ntBASIC12.23□□□□□ -0.45
TnfP06804 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TnfP06804 Gm6653-201ENSMUST00000218063 1288 ntBASIC12.23□□□□□ -0.45
TnfP06804 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
TnfP06804 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
TnfP06804 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TnfP06804 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
TnfP06804 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TnfP06804 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TnfP06804 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TnfP06804 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TnfP06804 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TnfP06804 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TnfP06804 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TnfP06804 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TnfP06804 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TnfP06804 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TnfP06804 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.22□□□□□ -0.45
TnfP06804 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TnfP06804 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TnfP06804 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
TnfP06804 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TnfP06804 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TnfP06804 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TnfP06804 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TnfP06804 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TnfP06804 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
TnfP06804 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC12.22□□□□□ -0.45
TnfP06804 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TnfP06804 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.22□□□□□ -0.45
TnfP06804 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
TnfP06804 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.22□□□□□ -0.45
TnfP06804 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TnfP06804 Gm3329-201ENSMUST00000159873 556 ntBASIC12.22□□□□□ -0.45
TnfP06804 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TnfP06804 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TnfP06804 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TnfP06804 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC12.22□□□□□ -0.45
TnfP06804 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.22□□□□□ -0.45
TnfP06804 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
TnfP06804 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.22□□□□□ -0.45
TnfP06804 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TnfP06804 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC12.22□□□□□ -0.45
TnfP06804 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.22□□□□□ -0.45
TnfP06804 Gm19009-201ENSMUST00000223072 823 ntBASIC12.22□□□□□ -0.45
TnfP06804 Lect2-202ENSMUST00000225183 823 ntBASIC12.22□□□□□ -0.45
TnfP06804 AC136376.2-201ENSMUST00000228819 490 ntBASIC12.22□□□□□ -0.45
TnfP06804 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TnfP06804 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TnfP06804 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TnfP06804 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
TnfP06804 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
TnfP06804 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
TnfP06804 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
TnfP06804 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TnfP06804 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TnfP06804 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TnfP06804 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.22□□□□□ -0.45
TnfP06804 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
TnfP06804 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
TnfP06804 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.21□□□□□ -0.45
TnfP06804 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TnfP06804 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TnfP06804 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TnfP06804 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TnfP06804 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TnfP06804 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TnfP06804 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TnfP06804 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
TnfP06804 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TnfP06804 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
TnfP06804 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TnfP06804 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.21□□□□□ -0.45
TnfP06804 Gm9415-201ENSMUST00000200462 1321 ntBASIC12.21□□□□□ -0.45
TnfP06804 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TnfP06804 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms