Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC7.27□□□□□ -1.25
P06320 Gm8494-201ENSMUST00000178171 1233 ntBASIC7.27□□□□□ -1.25
P06320 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
P06320 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
P06320 Gm18711-201ENSMUST00000199341 750 ntBASIC7.27□□□□□ -1.25
P06320 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
P06320 Gm44711-201ENSMUST00000205414 1264 ntBASIC7.27□□□□□ -1.25
P06320 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC7.27□□□□□ -1.25
P06320 Gm39404-201ENSMUST00000216350 313 ntBASIC7.27□□□□□ -1.25
P06320 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC7.27□□□□□ -1.25
P06320 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
P06320 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
P06320 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
P06320 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
P06320 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC7.27□□□□□ -1.25
P06320 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
P06320 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
P06320 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
P06320 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
P06320 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
P06320 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
P06320 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
P06320 Lama5-201ENSMUST00000015791 11388 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
P06320 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
P06320 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
P06320 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
P06320 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
P06320 Rims2-204ENSMUST00000226410 3685 ntBASIC7.27□□□□□ -1.25
P06320 Zfat-204ENSMUST00000162054 4386 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
P06320 Bcor-201ENSMUST00000043441 6113 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
P06320 Gm10417-201ENSMUST00000194341 3522 ntBASIC7.27□□□□□ -1.25
P06320 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
P06320 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
P06320 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
P06320 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC7.27□□□□□ -1.25
P06320 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
P06320 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
P06320 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
P06320 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
P06320 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
P06320 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
P06320 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
P06320 Gm38089-201ENSMUST00000193585 1514 ntBASIC7.27□□□□□ -1.25
P06320 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
P06320 Galnt15-201ENSMUST00000022460 6326 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
P06320 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
P06320 Brca2-201ENSMUST00000044620 10724 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
P06320 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
P06320 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
P06320 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC7.26□□□□□ -1.25
P06320 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
P06320 Firre-206ENSMUST00000203933 5555 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
P06320 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
P06320 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
P06320 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
P06320 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
P06320 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
P06320 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
P06320 Ncapd3-202ENSMUST00000086198 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
P06320 4930539E08Rik-201ENSMUST00000062357 4597 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
P06320 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC7.26□□□□□ -1.25
P06320 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC7.26□□□□□ -1.25
P06320 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
P06320 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
P06320 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
P06320 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
P06320 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC7.26□□□□□ -1.25
P06320 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
P06320 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
P06320 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
P06320 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
P06320 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
P06320 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
P06320 Ccdc187-202ENSMUST00000217256 9411 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
P06320 Muc5ac-201ENSMUST00000041924 8256 ntAPPRIS P2 TSL 5 BASIC7.26□□□□□ -1.25
P06320 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
P06320 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC7.26□□□□□ -1.25
P06320 Gm13736-201ENSMUST00000119272 253 ntBASIC7.26□□□□□ -1.25
P06320 Gm13342-201ENSMUST00000121055 207 ntBASIC7.26□□□□□ -1.25
P06320 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC7.26□□□□□ -1.25
P06320 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC7.26□□□□□ -1.25
P06320 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC7.26□□□□□ -1.25
P06320 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
P06320 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
P06320 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC7.26□□□□□ -1.25
P06320 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
P06320 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
P06320 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC7.26□□□□□ -1.25
P06320 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC7.26□□□□□ -1.25
P06320 Gm38241-201ENSMUST00000192641 898 ntBASIC7.26□□□□□ -1.25
P06320 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC7.26□□□□□ -1.25
P06320 Gm43692-201ENSMUST00000198236 1062 ntBASIC7.26□□□□□ -1.25
P06320 Gm45668-201ENSMUST00000211271 493 ntBASIC7.26□□□□□ -1.25
P06320 Gm29705-201ENSMUST00000212598 474 ntBASIC7.26□□□□□ -1.25
P06320 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC7.26□□□□□ -1.25
P06320 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC7.26□□□□□ -1.25
P06320 AC022775.2-201ENSMUST00000227885 646 ntBASIC7.26□□□□□ -1.25
P06320 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
P06320 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
P06320 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 200.7 ms