Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PdgfrbP05622 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
PdgfrbP05622 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
PdgfrbP05622 Gm18829-201ENSMUST00000188150 1622 ntBASIC11.74□□□□□ -0.53
PdgfrbP05622 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PdgfrbP05622 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
PdgfrbP05622 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
PdgfrbP05622 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.74□□□□□ -0.53
PdgfrbP05622 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
PdgfrbP05622 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.74□□□□□ -0.53
PdgfrbP05622 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
PdgfrbP05622 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
PdgfrbP05622 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PdgfrbP05622 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PdgfrbP05622 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
PdgfrbP05622 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PdgfrbP05622 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PdgfrbP05622 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.73□□□□□ -0.53
PdgfrbP05622 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PdgfrbP05622 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
PdgfrbP05622 Gm8199-201ENSMUST00000121323 823 ntBASIC11.73□□□□□ -0.53
PdgfrbP05622 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.73□□□□□ -0.53
PdgfrbP05622 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
PdgfrbP05622 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
PdgfrbP05622 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.73□□□□□ -0.53
PdgfrbP05622 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PdgfrbP05622 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.73□□□□□ -0.53
PdgfrbP05622 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
PdgfrbP05622 Gm29199-201ENSMUST00000187766 775 ntBASIC11.73□□□□□ -0.53
PdgfrbP05622 Gm5733-201ENSMUST00000190232 939 ntBASIC11.73□□□□□ -0.53
PdgfrbP05622 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PdgfrbP05622 Gm44387-201ENSMUST00000196298 145 ntBASIC11.73□□□□□ -0.53
PdgfrbP05622 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.73□□□□□ -0.53
PdgfrbP05622 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
PdgfrbP05622 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
PdgfrbP05622 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.73□□□□□ -0.53
PdgfrbP05622 Gm45276-201ENSMUST00000209549 1086 ntBASIC11.73□□□□□ -0.53
PdgfrbP05622 Gm6867-201ENSMUST00000219165 425 ntBASIC11.73□□□□□ -0.53
PdgfrbP05622 CT025552.1-201ENSMUST00000224561 521 ntBASIC11.73□□□□□ -0.53
PdgfrbP05622 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PdgfrbP05622 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
PdgfrbP05622 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PdgfrbP05622 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
PdgfrbP05622 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
PdgfrbP05622 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PdgfrbP05622 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PdgfrbP05622 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PdgfrbP05622 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PdgfrbP05622 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
PdgfrbP05622 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
PdgfrbP05622 Rgr-203ENSMUST00000225070 4704 ntBASIC11.73□□□□□ -0.53
PdgfrbP05622 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
PdgfrbP05622 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
PdgfrbP05622 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.73□□□□□ -0.53
PdgfrbP05622 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.73□□□□□ -0.53
PdgfrbP05622 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.72□□□□□ -0.53
PdgfrbP05622 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PdgfrbP05622 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
PdgfrbP05622 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PdgfrbP05622 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
PdgfrbP05622 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
PdgfrbP05622 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
PdgfrbP05622 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.72□□□□□ -0.53
PdgfrbP05622 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
PdgfrbP05622 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
PdgfrbP05622 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PdgfrbP05622 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PdgfrbP05622 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.72□□□□□ -0.53
PdgfrbP05622 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PdgfrbP05622 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
PdgfrbP05622 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
PdgfrbP05622 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
PdgfrbP05622 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
PdgfrbP05622 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
PdgfrbP05622 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
PdgfrbP05622 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
PdgfrbP05622 Gm12217-201ENSMUST00000118858 696 ntBASIC11.72□□□□□ -0.53
PdgfrbP05622 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.72□□□□□ -0.53
PdgfrbP05622 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
PdgfrbP05622 Gm18734-201ENSMUST00000172937 808 ntBASIC11.72□□□□□ -0.53
PdgfrbP05622 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
PdgfrbP05622 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.72□□□□□ -0.53
PdgfrbP05622 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
PdgfrbP05622 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PdgfrbP05622 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.72□□□□□ -0.53
PdgfrbP05622 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PdgfrbP05622 AU022133-201ENSMUST00000200601 873 ntBASIC11.72□□□□□ -0.53
PdgfrbP05622 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC11.72□□□□□ -0.53
PdgfrbP05622 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
PdgfrbP05622 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.72□□□□□ -0.53
PdgfrbP05622 Gm18065-201ENSMUST00000221395 526 ntBASIC11.72□□□□□ -0.53
PdgfrbP05622 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
PdgfrbP05622 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PdgfrbP05622 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
PdgfrbP05622 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
PdgfrbP05622 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PdgfrbP05622 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
PdgfrbP05622 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
PdgfrbP05622 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PdgfrbP05622 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms