Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Gm16219-201ENSMUST00000120096 274 ntBASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Gm15549-201ENSMUST00000121595 622 ntBASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Gm37284-201ENSMUST00000193607 539 ntBASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Gm43163-201ENSMUST00000196571 442 ntBASIC11.34□□□□□ -0.59
Rrp8Q9DB85 AC126799.1-201ENSMUST00000221976 246 ntBASIC11.34□□□□□ -0.59
Rrp8Q9DB85 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.34□□□□□ -0.59
Rrp8Q9DB85 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC11.34□□□□□ -0.59
Rrp8Q9DB85 n-R5s185-201ENSMUST00000083953 119 ntBASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rrp8Q9DB85 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Pck2-205ENSMUST00000226352 2784 ntBASIC11.33□□□□□ -0.59
Rrp8Q9DB85 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Rrp8Q9DB85 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rrp8Q9DB85 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.33□□□□□ -0.6
Rrp8Q9DB85 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Gm12194-201ENSMUST00000117756 1012 ntBASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Gm15329-201ENSMUST00000121408 155 ntBASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC11.33□□□□□ -0.6
Rrp8Q9DB85 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Gm28833-201ENSMUST00000189671 559 ntBASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Gm44124-201ENSMUST00000204159 472 ntBASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Gm44647-201ENSMUST00000207402 428 ntBASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Gm18460-201ENSMUST00000208088 464 ntBASIC11.33□□□□□ -0.6
Rrp8Q9DB85 AC168279.1-201ENSMUST00000214611 382 ntBASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Gm30671-201ENSMUST00000214898 318 ntBASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Gm18968-201ENSMUST00000221319 862 ntBASIC11.33□□□□□ -0.6
Rrp8Q9DB85 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Gm16380-201ENSMUST00000077997 478 ntBASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rrp8Q9DB85 AC130823.1-201ENSMUST00000228929 1549 ntBASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Rrp8Q9DB85 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms