Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Upk1aQ9D132 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk1aQ9D132 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Upk1aQ9D132 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Upk1aQ9D132 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.92□□□□□ -0.66
Upk1aQ9D132 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC10.92□□□□□ -0.66
Upk1aQ9D132 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Upk1aQ9D132 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk1aQ9D132 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Upk1aQ9D132 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk1aQ9D132 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Upk1aQ9D132 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Gm45041-201ENSMUST00000207366 3108 ntBASIC10.91□□□□□ -0.66
Upk1aQ9D132 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Gm44663-201ENSMUST00000206898 3150 ntBASIC10.91□□□□□ -0.66
Upk1aQ9D132 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Gm26286-201ENSMUST00000104166 134 ntBASIC10.91□□□□□ -0.66
Upk1aQ9D132 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Gm13392-201ENSMUST00000117708 150 ntBASIC10.91□□□□□ -0.66
Upk1aQ9D132 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC10.91□□□□□ -0.66
Upk1aQ9D132 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk1aQ9D132 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Upk1aQ9D132 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.91□□□□□ -0.66
Upk1aQ9D132 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk1aQ9D132 CT025533.2-201ENSMUST00000228715 1248 ntBASIC10.91□□□□□ -0.66
Upk1aQ9D132 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Gm5846-201ENSMUST00000193146 1414 ntBASIC10.91□□□□□ -0.66
Upk1aQ9D132 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Upk1aQ9D132 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Upk1aQ9D132 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.9□□□□□ -0.66
Upk1aQ9D132 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.66
Upk1aQ9D132 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Upk1aQ9D132 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk1aQ9D132 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Upk1aQ9D132 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Upk1aQ9D132 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk1aQ9D132 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk1aQ9D132 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Upk1aQ9D132 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk1aQ9D132 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk1aQ9D132 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk1aQ9D132 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk1aQ9D132 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk1aQ9D132 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Upk1aQ9D132 Gm45161-201ENSMUST00000207316 2263 ntBASIC10.9□□□□□ -0.66
Upk1aQ9D132 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC10.9□□□□□ -0.66
Upk1aQ9D132 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Upk1aQ9D132 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk1aQ9D132 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk1aQ9D132 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC10.9□□□□□ -0.66
Upk1aQ9D132 Gm11222-201ENSMUST00000119005 738 ntBASIC10.9□□□□□ -0.66
Upk1aQ9D132 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Upk1aQ9D132 Gm6963-201ENSMUST00000147879 379 ntBASIC10.9□□□□□ -0.66
Upk1aQ9D132 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Upk1aQ9D132 Gm17420-201ENSMUST00000164753 153 ntBASIC10.9□□□□□ -0.66
Upk1aQ9D132 Gm5070-201ENSMUST00000177599 862 ntBASIC10.9□□□□□ -0.66
Upk1aQ9D132 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Upk1aQ9D132 Gm3096-201ENSMUST00000185770 364 ntBASIC10.9□□□□□ -0.66
Upk1aQ9D132 Gm6621-201ENSMUST00000193251 772 ntBASIC10.9□□□□□ -0.66
Upk1aQ9D132 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC10.9□□□□□ -0.66
Upk1aQ9D132 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC10.9□□□□□ -0.66
Upk1aQ9D132 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC10.9□□□□□ -0.66
Upk1aQ9D132 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Upk1aQ9D132 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.9□□□□□ -0.66
Upk1aQ9D132 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms