Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh18Q8VHR0 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh18Q8VHR0 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh18Q8VHR0 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh18Q8VHR0 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh18Q8VHR0 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.2□□□□□ -0.62
Pcdh18Q8VHR0 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh18Q8VHR0 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Pcdh18Q8VHR0 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh18Q8VHR0 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh18Q8VHR0 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.2□□□□□ -0.62
Pcdh18Q8VHR0 Gm12742-201ENSMUST00000117326 410 ntBASIC11.2□□□□□ -0.62
Pcdh18Q8VHR0 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.2□□□□□ -0.62
Pcdh18Q8VHR0 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.2□□□□□ -0.62
Pcdh18Q8VHR0 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.2□□□□□ -0.62
Pcdh18Q8VHR0 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.2□□□□□ -0.62
Pcdh18Q8VHR0 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.2□□□□□ -0.62
Pcdh18Q8VHR0 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh18Q8VHR0 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh18Q8VHR0 Gm9899-201ENSMUST00000065519 555 ntBASIC11.2□□□□□ -0.62
Pcdh18Q8VHR0 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh18Q8VHR0 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
Pcdh18Q8VHR0 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh18Q8VHR0 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh18Q8VHR0 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh18Q8VHR0 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh18Q8VHR0 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh18Q8VHR0 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh18Q8VHR0 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh18Q8VHR0 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Pcdh18Q8VHR0 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.2□□□□□ -0.62
Pcdh18Q8VHR0 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh18Q8VHR0 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Gm23931-201ENSMUST00000103842 109 ntBASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Gm4986-201ENSMUST00000119731 549 ntBASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Gm25043-201ENSMUST00000158604 212 ntBASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Gm38002-201ENSMUST00000193255 180 ntBASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Gm42693-201ENSMUST00000196779 631 ntBASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Gm42627-201ENSMUST00000197347 224 ntBASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Gm43630-201ENSMUST00000201550 776 ntBASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh18Q8VHR0 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh18Q8VHR0 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh18Q8VHR0 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.18□□□□□ -0.62
Pcdh18Q8VHR0 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh18Q8VHR0 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh18Q8VHR0 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh18Q8VHR0 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.18□□□□□ -0.62
Pcdh18Q8VHR0 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.18□□□□□ -0.62
Pcdh18Q8VHR0 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh18Q8VHR0 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Pcdh18Q8VHR0 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.18□□□□□ -0.62
Pcdh18Q8VHR0 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh18Q8VHR0 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh18Q8VHR0 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh18Q8VHR0 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh18Q8VHR0 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Pcdh18Q8VHR0 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Pcdh18Q8VHR0 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.18□□□□□ -0.62
Pcdh18Q8VHR0 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.18□□□□□ -0.62
Pcdh18Q8VHR0 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh18Q8VHR0 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh18Q8VHR0 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh18Q8VHR0 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh18Q8VHR0 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms