Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rc3h1Q4VGL6 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rc3h1Q4VGL6 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Rc3h1Q4VGL6 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
Rc3h1Q4VGL6 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rc3h1Q4VGL6 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rc3h1Q4VGL6 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Rc3h1Q4VGL6 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rc3h1Q4VGL6 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.41□□□□□ -0.26
Rc3h1Q4VGL6 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rc3h1Q4VGL6 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rc3h1Q4VGL6 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rc3h1Q4VGL6 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Rc3h1Q4VGL6 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rc3h1Q4VGL6 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rc3h1Q4VGL6 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rc3h1Q4VGL6 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Rc3h1Q4VGL6 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rc3h1Q4VGL6 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rc3h1Q4VGL6 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC13.4□□□□□ -0.26
Rc3h1Q4VGL6 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Rc3h1Q4VGL6 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Rc3h1Q4VGL6 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Rc3h1Q4VGL6 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rc3h1Q4VGL6 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rc3h1Q4VGL6 Gm4900-201ENSMUST00000222046 1628 ntBASIC13.4□□□□□ -0.26
Rc3h1Q4VGL6 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Rc3h1Q4VGL6 Gm12516-201ENSMUST00000120819 385 ntBASIC13.4□□□□□ -0.26
Rc3h1Q4VGL6 Mir1901-201ENSMUST00000122616 78 ntBASIC13.4□□□□□ -0.26
Rc3h1Q4VGL6 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rc3h1Q4VGL6 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rc3h1Q4VGL6 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rc3h1Q4VGL6 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC13.4□□□□□ -0.26
Rc3h1Q4VGL6 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rc3h1Q4VGL6 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rc3h1Q4VGL6 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC13.4□□□□□ -0.26
Rc3h1Q4VGL6 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Rc3h1Q4VGL6 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Rc3h1Q4VGL6 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Rc3h1Q4VGL6 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC13.4□□□□□ -0.26
Rc3h1Q4VGL6 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rc3h1Q4VGL6 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rc3h1Q4VGL6 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rc3h1Q4VGL6 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Rc3h1Q4VGL6 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rc3h1Q4VGL6 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rc3h1Q4VGL6 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Rc3h1Q4VGL6 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Rc3h1Q4VGL6 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Gm6655-201ENSMUST00000201932 1309 ntBASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Gm44190-201ENSMUST00000205083 1401 ntBASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Gm26013-201ENSMUST00000104404 119 ntBASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Gm13182-201ENSMUST00000122241 312 ntBASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Gm25492-201ENSMUST00000157383 129 ntBASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Mir6998-201ENSMUST00000183343 64 ntBASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Gm8531-201ENSMUST00000188319 893 ntBASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Gm17877-201ENSMUST00000192578 814 ntBASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Gm45219-201ENSMUST00000205602 465 ntBASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 AC166341.2-201ENSMUST00000220571 120 ntBASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Gm17213-201ENSMUST00000165161 1360 ntBASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Gm44573-201ENSMUST00000191753 2370 ntBASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rc3h1Q4VGL6 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rc3h1Q4VGL6 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms